Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00309 ATGGACAACGACACTCACGCGCCGGCCACCGCAGAGGCAGAAGTAGCACACGATTTCCCCGGCCTCATCCGTGTCTTCACCGACGGTCGCATCCAACGTTTCAAAGGAACCGACGTCGTTCCACCCTCCACCCCCACCACTCACCCCGTTTCATCAAAAGACGTCACTCTCAACCCTCATTCCACTCTCTCCGCTCGCCTCTTCCTCCCGACACCTCCATCCACCACCACCAACCAGCGCCGCAGCCTCCCTCTCTTGGTCTACTTCCACGGCGGTGGCTTCTGCACCTCCTCCCCCTTCACGTCAACCTACCACCACTACATCGCAGCTGTCGCCGCCGAAGCCAAGCTCGTCGCCGTCTCCGTCGAGTACAGGCTGGCCCCGGAGCACCCTATTCCGGCAGCGTACGAGGATTCGTGGGCTGCACTGCAATGGGTCGCGTCACACCGCAGTAACGCTGGACCAGAGCCTTGGTTGAATGAAAATGTAGACTTCGGAAGAGTGTTCTTGGCCGGGGACAGTGCCGGTGCCAACATAGTGCATAACTTAACAATGTTACTTGGGGACCCGGATTGGGACATTGGAATAGACATCCTAGGAGTTTGTCTTGTCCACCCGTATTTTTGGGGTTCGGTTCCTTTCGGATCCGAGACCATGGATTTGGATAAGAAGGCCGTGCTGGACCGGCTCTGGCCCTTTGTGTGTCCGGAGTCGCCGGACAATGATGACCCACGGGTTAACCCGGTGGGGGAGGAAGCACCAAGCTTGGCATGGCTAGGGTGCAGGAGGGTGCTGGTTTGTGTGGCGGAGAAGGATGTGCTGAAGGAGAGAGGGTGGATTTATTACAATGCTTTGAGTAGGAGTGGGTGGATGGGGGTGGTGGAAATTAAGGAGACTCAAGGGGAGGGTCATGTCTTTCATCTTCTTGACTTGGCTAGTGACAAGGCTCAGGATTTGATCAAACGCTTGGCTCTTTTCTTCAACAGAGATCAGCCTCCTTCAATTTAA 1008 0.5615 MDNDTHAPATAEAEVAHDFPGLIRVFTDGRIQRFKGTDVVPPSTPTTHPVSSKDVTLNPHSTLSARLFLPTPPSTTTNQRRSLPLLVYFHGGGFCTSSPFTSTYHHYIAAVAAEAKLVAVSVEYRLAPEHPIPAAYEDSWAALQWVASHRSNAGPEPWLNENVDFGRVFLAGDSAGANIVHNLTMLLGDPDWDIGIDILGVCLVHPYFWGSVPFGSETMDLDKKAVLDRLWPFVCPESPDNDDPRVNPVGEEAPSLAWLGCRRVLVCVAEKDVLKERGWIYYNALSRSGWMGVVEIKETQGEGHVFHLLDLASDKAQDLIKRLALFFNRDQPPSI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00309 335 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 168 180 IPR033140 -
Viun8g00309 335 PANTHER ARYLACETAMIDE DEACETYLASE 19 311 - -
Viun8g00309 335 Gene3D alpha/beta hydrolase 25 331 IPR029058 -
Viun8g00309 335 Pfam alpha/beta hydrolase fold 86 307 IPR013094 GO:0016787
Viun8g00309 335 SUPERFAMILY alpha/beta-Hydrolases 11 329 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00309 Viun-Chr8 1950254 1951588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00309 12 331 Carbohydrate Esterase AT3G48700 46.341 4.80e-99 294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00309 8 1950254 1951588 Viun8g00309 8 1950254 1951588 ECH
Viun8g00309 8 1950254 1951588 Viun9g03507 9 40996785 40997999 PCT