Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00304 ATGGCAGCAATGAAAAACCATGTATCTCCAGTTCCAAGAGAATCTGATGAGAAACACCTTGTTACTGTGCTTAGTATTGATGGTGGTGGCATTCGGGGAATCATTCCAGGAATCATTCTTGGTTTCCTCGAATCAGAGCTTCAGAGGCTTGATGGTGATGATGATGTAAGATTAGCAGATTACTTTGATGTGATTGCAGGAACAAGCACTGGTGGATTGGTCACTGCAATGCTTACCGCTCCAAATGAAAATAATCGACCATTGTATGCAGCCAAAGATCTTAAGCGTTTCTACCTTGAAAATTCTCCAAAATTCTTCCCACAGAACAAGTGCTGGAATTTAATCGCTTCTGTGATGAAGTTCAGCAAGACTATGTTTGGACCATCGTACGATGGGAAGTATTTACACCAGCTTATTAGGGAAAGACTAGGGGAAACAAGGTTGCACCAGACATTGACCAATGTTGTCATCCCAACATTTGACATCAAACGCCTTCAACCTACCATCTTTTCCACCTTCCAGTTGAGGAAGAGGCCAGATTTGAATGCATTGTTGTCGGATATATGCATTTCAACTTCAGCAGCTCCGACCTATCTTCCAGCACATTACTTCGAAACCAAAACCCAACATGGTCATGTCATGGGAAAGTTTGACCTAATAGACGGTGGCGTCGCAGCAAATAACCCGACACTGGTGGCCATGGCAGAAGTGACAAACCAAATTTCCCACGAAGGGCAAGGTGGTAGCTTGAAGGTGGAAGCCATGCAATACGATAGGTTTTTGGTGTTATCATTGGGAACAGGTTCTCAGAAACAGGAATCGAAATACAGTGCTAAAGAAGCTGCTGATTGGGGTATCTTGAGCTGGGTTTCCACAACCAGTGGCAGCACCCCTTTAATTGATGCCTTCACTCAAGCCAGTGCTGACATGGTTGATTTTCACATTTCCTCCGTTTTTCGAGCACTCAATTCTGAACAAAACTACCTTAGAATCCAGGACGATACGTTAACTGGGAACTTATCTTCTGTGGACATGGCCACTGAGGAGAATTTGAATGAACTGGTCTCCGTTGGGGAATCATTGTTGGATAAACCAGTTTCCAGGATTAACTTGAAGACTGGAGTTTACGAATCTGCTAGACCCTCTGAAACAAACAAAGAAGCCTTGACCAGATTTGCGATACGACTATCCAAACAGAAGCGATTTCGAAAATCTGAGATGTCTGCAAATAATGGAAATTCTCAAAAGACAGTTGTATGA 1260 0.4317 MAAMKNHVSPVPRESDEKHLVTVLSIDGGGIRGIIPGIILGFLESELQRLDGDDDVRLADYFDVIAGTSTGGLVTAMLTAPNENNRPLYAAKDLKRFYLENSPKFFPQNKCWNLIASVMKFSKTMFGPSYDGKYLHQLIRERLGETRLHQTLTNVVIPTFDIKRLQPTIFSTFQLRKRPDLNALLSDICISTSAAPTYLPAHYFETKTQHGHVMGKFDLIDGGVAANNPTLVAMAEVTNQISHEGQGGSLKVEAMQYDRFLVLSLGTGSQKQESKYSAKEAADWGILSWVSTTSGSTPLIDAFTQASADMVDFHISSVFRALNSEQNYLRIQDDTLTGNLSSVDMATEENLNELVSVGESLLDKPVSRINLKTGVYESARPSETNKEALTRFAIRLSKQKRFRKSEMSANNGNSQKTVV 419
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00304 419 SUPERFAMILY FabD/lysophospholipase-like 21 375 IPR016035 -
Viun8g00304 419 Gene3D Cytosolic phospholipase A2 catalytic domain 11 409 - -
Viun8g00304 419 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 234 IPR002641 GO:0006629
Viun8g00304 419 FunFam Patatin 13 408 - -
Viun8g00304 419 PANTHER XYLOSE ISOMERASE 15 405 - -
Viun8g00304 419 Pfam Patatin-like phospholipase 24 234 IPR002641 GO:0006629
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun8g00304 Viun-Chr8 1925262 1930375 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00304 19 403 Miscellaneous Gene Families AT2G26560 61.598 7.78e-168 475
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00304 8 1925262 1930375 Viun8g00304 8 1925262 1930375 ECH