Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00300 ATGGCAGCAACTCAAACTCCAAGCAAAGTTGATGATGGAGCACTGATTACTGTGCTGAGTATTGATGGTGGTGGCATTCGTGGAATCATTCCCGGAATTTTGCTTGCTTTCCTCGAATCAGAACTTCAGAAACTGGATGGTGCTGATGCAAGACTCGCAGATTACTTTGATGTGATTGCAGGAACAAGCACCGGTGGATTAGTCACTGCAATGCTCACTGCTCCAAATGAAAATAATCGACCCTTGTATGCAGCCAAAGATATAAAGGATTTCTACCTTGAGCATACCCCAAAAATCTTCCCGCAGAGTAGTAGCTGGAATTTGATTGCAACAGCGATGAAGAAAGGCAGAAGTCTGATGGGACCACAGTACGATGGCAAGTATTTACACAAGCTCGTTAGGGAAAAACTAGGGAACACAAAATTGGAACACACATTAACCAATGTCGTTATCCCAGCATTTGATATCAAAAACCTTCAACCCGCCATCTTTTCCAGCTTCCAGGTGAAGAAGAGGCCATATTTGAATGCGGCGTTGTCTGATATATGCATTTCAACCTCGGCAGCACCAACCTATCTCCCAGCTCATTGCTTTGAAACTAAAACCAGCACTGCTAGTTTCAAATTCGACCTTGTAGATGGTGGTGTAGCAGCAAATAACCCGGCTCTGGTGGCGATGGCAGAAGTGTCGAACGAAATCCGCAATGAAGGGTCATGTGCAAGCTTGAAAGTAAAACCGTTGCAATACAAAAAGTTTTTGGTGATATCGTTGGGAACAGGTTCTCAGCAACACGAAATGAGATACAGTGCTGATAAGGCATCGACATGGGGCCTTGTGGGTTGGCTTTCCTCCTCCGGTGGCACTCCTCTCATCGATGTTTTCAGCCATGCTAGTTCTGACATGGTTGATTTCCACATCTCCTCCGTTTTCCAAGCACGCCATGCTGAACAAAACTACCTCCGAATCCAGGATGATACTTTAACTGGGGACTTAGGTTCGGTGGACGTGGCCACGGAGAAGAATCTGAATGGCCTCGTCCAAGTTGCGGAAGCATTGTTAAAGAAACCAGTTTCAAAGATTAACTTGAGGACCGGTATTCATGAACCTGTTGAGTCTAACGAAACCAACGCAGAAGCCTTGAAGAGGTTTGCGGCACGACTATCCAACCAGAGGAGATTTCGGAAATCTCAAACGTTTGCGTAG 1203 0.4564 MAATQTPSKVDDGALITVLSIDGGGIRGIIPGILLAFLESELQKLDGADARLADYFDVIAGTSTGGLVTAMLTAPNENNRPLYAAKDIKDFYLEHTPKIFPQSSSWNLIATAMKKGRSLMGPQYDGKYLHKLVREKLGNTKLEHTLTNVVIPAFDIKNLQPAIFSSFQVKKRPYLNAALSDICISTSAAPTYLPAHCFETKTSTASFKFDLVDGGVAANNPALVAMAEVSNEIRNEGSCASLKVKPLQYKKFLVISLGTGSQQHEMRYSADKASTWGLVGWLSSSGGTPLIDVFSHASSDMVDFHISSVFQARHAEQNYLRIQDDTLTGDLGSVDVATEKNLNGLVQVAEALLKKPVSKINLRTGIHEPVESNETNAEALKRFAARLSNQRRFRKSQTFA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00300 400 FunFam Patatin 8 399 - -
Viun8g00300 400 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 19 226 IPR002641 GO:0006629
Viun8g00300 400 Pfam Patatin-like phospholipase 19 226 IPR002641 GO:0006629
Viun8g00300 400 SUPERFAMILY FabD/lysophospholipase-like 17 374 IPR016035 -
Viun8g00300 400 CDD Pat17_isozyme_like 13 365 - -
Viun8g00300 400 Gene3D Cytosolic phospholipase A2 catalytic domain 5 399 - -
Viun8g00300 400 PANTHER XYLOSE ISOMERASE 4 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00300 Viun-Chr8 1908793 1911348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00300 13 394 Miscellaneous Gene Families AT2G26560 59.791 4.96e-164 464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00300 8 1908793 1911348 Viun8g00300 8 1908793 1911348 ECH