Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00285 ATGGTGTTTCAATCTCATTCTGGATCACTGAGCTGGCAGATGATGCAGGGAAGCTCGAGAATCGCAAATAAATGTGGAAAAGCCTCAAGCAGAGAAAGAAAATTGGCTTTGAAACAAGATGTGGATAGGTTGAAGAAGAAGCTTAGGCATGAAGAGAATATTCATAGAGCATTGGAGAGGGCTTTCAACAGGCCATTGGGAGCTTTACCTCGTCTTCCTCCATATCTCCCTCCATGCATACTAGCTCTTCTGGCTGAAGTGGCGGTTCTGGAAGAGGAAATTGTAAGGCTTGAAGAGAAAGTTGTGCATTTCAGACAGGATTTGTACCAGGAAGCTGTCTACATGTCATCTTCTATGAGGAAACTTGAACATTCAGTTTCAGCTCCTCCAAAGAAGTCAAATTCAACAATGGATAGTCCCAAGTTGGAAAAATTGAAGTTTCAATCCCAAACAGTTGGTAATTCAGCAGCATCATCTGCAACTATGCCTACCACAACTCTCATAGAGGATAAGGAGAATCAAACATGTCGCAATTCTTCCAAGAGCAGGAATCAATCATCCAACCATATGAACAAATATCCAATCAAAAAACTTCACAATAAATCCCCACAGAAAAGGTTGGATCATCCAAAAATAAAGCAAGAACCAAGGTTGAACGGCCAGCAAATTGCAGATTTGAGAAACCATAGTACACATAAAAGTTCATCAGAAGCTGAGCGACCAAATATAATTTCAGAAAATATTGTGAAGTGCTTATCAAGCATTCTCTTGAGAATGAGTGCTGTGAAGAATCCAGGTTCTGCTTGTGACATTCCACACTTATGTGATCTAAGAACTAAAAATTGTGATGAAGGAACAGAGTTTGTGGATCCATATGGCATCTGTTTGGAATTTGGGAAGAGGGATATCGGTCCATACAAGCAATTATGTGAAATTGATGCTAAATCGTTCAATCCAAAACGAACTGCAAATACTTTGTTTTTACAGCATCGTTTGAAACTTCTTTTCAGGAAACTAGCCTCTGTCAACCTAGAAAACCTCAACCATCAGGAGAAGCTCGCATTCTGGATAAACATCTACAACTCCTGTATGATGAATGCATTTATAGAAAATGGCATACCAGAAAGTCCTGAAATGGCTGTTGCACTTATGAGGAAGGCAACAATAAATGTGGGTGGACACGTGCTAAGTGCAACAACCATAGAGCACTTCATTCTTAGACTTCCTTATCATTGGAGATTTACATTTTCCAAGGGAACAAAAAACCATGAAATGACAGTAAGAAGCATGTATGGACTGGAACTGTCAGAACCCCTTGTTACATTTGCTCTCTCTTGTGGAACCTGGTCCTCTCCTGCTGTGAGAGTTTACACTGCATCTCAGGTTGAGAATGAACTGGAAGTGGCCAAAAGAGAGTTCTTACAAGCAGCAATTGGATTTTCAACTTCAAAGTTTGTTCTCCCTAAGCTTCTGGATTGGTATTTACTGAACTTTGCAAAAGACTTAGAATCATTGCTGGATTGGATCTGCCTCCAGTTACCAAGTGAACTTGGGAAACAAGCCATAAAACTCATAGAGGAAAGAAAAACTGAGCCCCTCTCACAATTTGTACAAATAATGCCATATGAGTTCAGCTTTAGATACTTGATATGCACATAA 1659 0.399 MVFQSHSGSLSWQMMQGSSRIANKCGKASSRERKLALKQDVDRLKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPCILALLAEVAVLEEEIVRLEEKVVHFRQDLYQEAVYMSSSMRKLEHSVSAPPKKSNSTMDSPKLEKLKFQSQTVGNSAASSATMPTTTLIEDKENQTCRNSSKSRNQSSNHMNKYPIKKLHNKSPQKRLDHPKIKQEPRLNGQQIADLRNHSTHKSSSEAERPNIISENIVKCLSSILLRMSAVKNPGSACDIPHLCDLRTKNCDEGTEFVDPYGICLEFGKRDIGPYKQLCEIDAKSFNPKRTANTLFLQHRLKLLFRKLASVNLENLNHQEKLAFWINIYNSCMMNAFIENGIPESPEMAVALMRKATINVGGHVLSATTIEHFILRLPYHWRFTFSKGTKNHEMTVRSMYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEVAKREFLQAAIGFSTSKFVLPKLLDWYLLNFAKDLESLLDWICLQLPSELGKQAIKLIEERKTEPLSQFVQIMPYEFSFRYLICT 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00285 552 Coils Coil 80 107 - -
Viun8g00285 552 Pfam Leucine-zipper of ternary complex factor MIP1 30 111 IPR025757 -
Viun8g00285 552 PANTHER EXPRESSED PROTEIN 24 550 - -
Viun8g00285 552 MobiDBLite consensus disorder prediction 148 239 - -
Viun8g00285 552 Pfam Protein of unknown function, DUF547 345 474 IPR006869 -
Viun8g00285 552 Coils Coil 27 61 - -
Viun8g00285 552 MobiDBLite consensus disorder prediction 148 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00285 Viun-Chr8 1838279 1842075 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00285 8 1838279 1842075 Viun8g00285 8 1838279 1842075 ECH
Viun8g00285 8 1838279 1842075 Viun9g03513 9 41048689 41052770 PCT