Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00277 ATGGCCCTCAACGACTTCTTCGCCGGCGAGATCGCGACGGAGCTTCTCAAAATGCTCATCAGCATCTCCCGGAAGTCGCTCCTCTGCCGTGCCAGCGCCGACCAACTCATCTCGTACATCCACGAGCTCCTCCCCACCATCGAGGAGATAAAGTACTCCGGCGTCGAGCTCCCCGCCCTGCGCCAGTCCCAGCTCCACCGTCTCTCGGAGCTTCTCCGGTCCGGCGTCGAGCTCTCCCACAAGGTCCTGGCCTCCAGCCGCTGGAACGTGTACCGCAACCTCCACCTCGCCAAGAAGATGGACAAGCTCGAGAAGACCGTTTCCAAGTTCCTCCTCGGCCCCATGCAGGCCCACATCATGGCCGACGTCCACCACACGCGCTTCGAGATGGCGGAGCGCTTCGACCGCGTTGACAACTCCGTCCGCCGCCTCGAGCAGTACTTCGGGAACATTAAGATTGGCGTCGGCGGCGGCGGCTGGGTTGAGGAGGCTGTTAGGAGCGTGGACGAGAATGTTGTTGACGGCAGCTCCGCCGTGGGGTTGGGGTTCGGGAAGATTAAGGTAAGGGAGATGCTTGTCGGAAGGGAGGATCTCTGGGTTGTCGGGATTTCTGGGATTGGCGGCTCCGGGAAGACCACTCTCGCTAGAGAGGTCTGCAAAGATGACCAAGTTAGATGTTATTTCAGGGAGAGGATTTTGTTCCTGACTGTGTCTCAGTCTCCAAACGTGGAGCAACTAAGAACGAAGATTTGGGGGTACATTATGGGAAATGAGAGATTGGATTCGAACTATGTGGTTCCACAGTGGGTGCCACAGTTTGAGTGCAAAATTGAAGCAGCTCGAACTCTGATTGTGTTGGATGATGTGTGGACACTCTCTGTGGTGGAGCAGCTTGTGTGCAGAATACCTGGTTGCAAGTTTCTTGTGGTGTCCAGAACGAAATTCCAAACGTTGGTGAGTTATGAAGTGGAATTGCTGAGTGAAGAGGATGCCTTGTCTCTGTTCTGTCACCATGCTTTTGGACAGAAATCAATCCCTTCAGCTGCTAATGAGAGTTTGGTGAAGCAGGTTGTCACTGAGTGTGGAAGGCTTCCTTTGGCTCTTAAGGTGATTGGAGCTTCTTTGCGAGATCAACCTGAGATGTTTTGGTTAAGCGTTAAGAACAGGTTATCTCAAGGCCAAAGCATTGGTGAATCCCACGAAATCAATCTGATTGAAAGAATGGGAATCAGTATCAATTACCTTCCAGAAAAGGTCAAGGAATGCTTCTTGGACCTGTGTTCATTTCCTGAGGATAAAAAAATCCCTTTGGATGTACTCATCAACATGTGGGTGGAAATCCATGACATTCCTGAAACAGAAGCTTATGCCATTGTTGTTGAACTCTCCAACAAAAATCTTCTCACCTTAATGAAAGAACATCGTGCAGGGGGCATGTATAGCAGCTGCTTTGAGATATCAGTTACTCAACATGATATACTGAGAAACCTAGCCATTAATCTGAGCAACCGTGCTAGCATTAATGAACGCAGGCGATTAGTAATGCCAAAAAGAGAAAACACAATTCCTAAAGAGTGGTTGAGATACAAACACAAACCATTTGAGGCTCAGATTGTTTCAGTTCATACAGGTGAAATGAAAGATGTGGACTGGTGTAATATGGAGTTTCCAAAAGCAGAAGTTTTGATCATTAATTTCACATCCACCGAGTACTTCTTACCTCAGTTCATCAACAGAATGCCAAATTTGAGAGCACTGATAATAATAAACTACAGTGCAACATATGCTTGCCTTCACAACATTTCAGTTTTCAAGAACTTGCCCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCACCCCAGAATTATCAGGCACTGTGTTGGAAAACTTGGGAAAACTTTTTATTGTCCTCTGCAAGATTAACAACAGTTTGGTTGAAAAAGAGGTAGATTTAGCCAAAGTCTTCCCAAACCTCTTTGACCTCACTCTTGATCATTGTGATGATCTAACCCAATTGCCCTCAAGCATCTGTGGAATGAAATCACTTCAAAACTTGAGTCTCACCAACTGCCACAATCTGAATCAATTGCCTCTTGAACTAGGGAAACTAAGATCTCTAGAGATTCTTCGTTTATATGCTTGCCCTGAACTGAAAACAGTGCCTAATAGCATATGTGAGATGATGAGATTGAAGTATATTGACATTTCTCAATGTGTGAACCTGAGATGTTTCCCTGAAGAGATTGGTAAAGTAGTGAGCTTGGAGAAGATTGATATGAGGGAATGTTCTATGATCAGAAATGTACCAAAGTCTGCATTGTCGTTGCAGTCTCTGCGACTTGTAATTTGTGACGAAGAGGTTTCTGGGATTTGGAAAGAGGTTGAGAAGGCGAAGCCTAATGTGCACATTCAAGTATCAGAACAGCACTTTGACTTGGACTGGCTTAAAGAATGA 2457 0.4664 MALNDFFAGEIATELLKMLISISRKSLLCRASADQLISYIHELLPTIEEIKYSGVELPALRQSQLHRLSELLRSGVELSHKVLASSRWNVYRNLHLAKKMDKLEKTVSKFLLGPMQAHIMADVHHTRFEMAERFDRVDNSVRRLEQYFGNIKIGVGGGGWVEEAVRSVDENVVDGSSAVGLGFGKIKVREMLVGREDLWVVGISGIGGSGKTTLAREVCKDDQVRCYFRERILFLTVSQSPNVEQLRTKIWGYIMGNERLDSNYVVPQWVPQFECKIEAARTLIVLDDVWTLSVVEQLVCRIPGCKFLVVSRTKFQTLVSYEVELLSEEDALSLFCHHAFGQKSIPSAANESLVKQVVTECGRLPLALKVIGASLRDQPEMFWLSVKNRLSQGQSIGESHEINLIERMGISINYLPEKVKECFLDLCSFPEDKKIPLDVLINMWVEIHDIPETEAYAIVVELSNKNLLTLMKEHRAGGMYSSCFEISVTQHDILRNLAINLSNRASINERRRLVMPKRENTIPKEWLRYKHKPFEAQIVSVHTGEMKDVDWCNMEFPKAEVLIINFTSTEYFLPQFINRMPNLRALIIINYSATYACLHNISVFKNLPNLRSLWLEKVSTPELSGTVLENLGKLFIVLCKINNSLVEKEVDLAKVFPNLFDLTLDHCDDLTQLPSSICGMKSLQNLSLTNCHNLNQLPLELGKLRSLEILRLYACPELKTVPNSICEMMRLKYIDISQCVNLRCFPEEIGKVVSLEKIDMRECSMIRNVPKSALSLQSLRLVICDEEVSGIWKEVEKAKPNVHIQVSEQHFDLDWLKE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00277 818 PRINTS Disease resistance protein signature 361 375 - -
Viun8g00277 818 PRINTS Disease resistance protein signature 200 215 - -
Viun8g00277 818 PRINTS Disease resistance protein signature 678 694 - -
Viun8g00277 818 PRINTS Disease resistance protein signature 276 290 - -
Viun8g00277 818 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 816 IPR039203 GO:0050832
Viun8g00277 818 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Viun8g00277 818 Gene3D - 325 406 IPR042197 -
Viun8g00277 818 Gene3D - 179 320 IPR027417 -
Viun8g00277 818 Gene3D Ribonuclease Inhibitor 535 802 IPR032675 -
Viun8g00277 818 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 135 IPR008808 -
Viun8g00277 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 426 IPR027417 -
Viun8g00277 818 Pfam NB-ARC domain 187 394 IPR002182 GO:0043531
Viun8g00277 818 SUPERFAMILY RNI-like 555 784 - -
Viun8g00277 818 Gene3D - 407 497 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00277 Viun-Chr8 1780102 1783295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00277 609 795 Receptor kinase-like Gene Family AT5G27060 25.532 1.96e-08 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00277 8 1780102 1783295 Viun8g00277 8 1780102 1783295 ECH