Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00275 ATGGGTGAGGAGCACCACCATGCACCGCCACCAGTTCAGGCGCCTCCGGCTGGTCCACCACCACCGAATCTTGCACTTTCTAGAGGTCCAGTGTGGAATCCAGCTGAACAACTCTTGCAGCTTCACTATTGCATCCACTCAAATCCTTCTTGGCCGGAGGCGCTTCTACTGGGTTTTCAGCACTACATTGTGATGCTTGGAACAACTGTTCTGATTGCAACCACGCTGGTTCCTGCAATGGGTGGGAACCATGGTGACAAGGCCCATGTTATTCAGTCATTGTTATTTATGTCTGGGGTGAACACACTGCTTCAGACTTTGTTTGGATCAAGGCTTCCAACTGTGATGGGTGGATCATTTGCTTTTTTACTCCCAGTGTTGTCCATTATAAACGATTACACAGACAGAACATTCCCTTCTGAGCATGAGAGGTTCGTCTACACTATCAGAACAATTCAAGGATCCCTCATTGTTTCTTCTTTCGTCAATATCTTCCTTGGGTTTAGCAAGACATGGGGAAACTTGACAAGGCTGTTTAGTCCCATTAGTATTGTACCTGTGGTATGTGTGGTGGGTCTTGGTCTGTTCTCCAGGGGCTTTCCATTGCTTGCAAATTGTGTGCAAATTGGCTTACCTATGCTCATTCTACTTGTCATAACACAACAGTATTTGAAGCGTCTTCATCATGCTGCACATCATGTACTTGAGAGGTTTGCTTTACTTCTCTGCATCGCTGTCATATGGGCATTTGCTGCTATCCTTACTGTCGCAGGTGCGTATAATACTGCTAAAGCTCAGACCCGAGTGAGTTGTCGCACTGATAGCTCTTACCTTATGTCTTCTGCTCCATGGATTAAAGTTCCATATCCATTCCAGTGGGGTACCCCCATTTTCAGAGCTAGTCATGTCTTTGGGATGATGGGGGCTGCACTTGTATCTTCTGCTGAGTCAACTGGTGCTTTCTTTGCTGCAGCCAGGCTTTCTGGTGCAACACCACCTCCTGCACATGTGCTCAGCCGAAGCATTGGGTTTCAGGGTATTGGCATGCTGATTGAAGGCATATTTGGTTCTGTTGTTGGTACTACTGTATCTGTTGAAAATGTAGGCCTACTTGGTCTAACACATATAGGGAGCCGCAGAGTTGTGCAGATATCATGTGGTTTCATGATCTTCTTCTCTATTTTCGGGAAATTTGGAGCCTTTTTCGCATCGATTCCCCTACCGATATTTGCTGCTATATACTGTGTTTTGTATGGTATTGTGGCTTCTGTTGGGATTTCTTTTATACAGTTTGCAAATACCAACTCCATAAGAAACATCTATGTTCTGGGGATAACCTTGTTTCTAGCTATATCAGTTCAACAATACTTTGTCACTAACACTGCACCAGATGGTCATGGTCCAGTTAAAACAGATGGTGGATGGTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATAATTGTTGGAACCCTAATTGACAACACACTTGAAGGAAAATCTAAAGCTGTGGACAGAGGACTTCCATGGTGGGGTCCTTTTCAGAATAGAAAGGGAGATGTTAGAAATGATGAGTTCTACCGTTTACCTCTCAGGATAAATGAGTATATGCCCACCAGATTTCTCTGA 1644 0.4453 MGEEHHHAPPPVQAPPAGPPPPNLALSRGPVWNPAEQLLQLHYCIHSNPSWPEALLLGFQHYIVMLGTTVLIATTLVPAMGGNHGDKAHVIQSLLFMSGVNTLLQTLFGSRLPTVMGGSFAFLLPVLSIINDYTDRTFPSEHERFVYTIRTIQGSLIVSSFVNIFLGFSKTWGNLTRLFSPISIVPVVCVVGLGLFSRGFPLLANCVQIGLPMLILLVITQQYLKRLHHAAHHVLERFALLLCIAVIWAFAAILTVAGAYNTAKAQTRVSCRTDSSYLMSSAPWIKVPYPFQWGTPIFRASHVFGMMGAALVSSAESTGAFFAAARLSGATPPPAHVLSRSIGFQGIGMLIEGIFGSVVGTTVSVENVGLLGLTHIGSRRVVQISCGFMIFFSIFGKFGAFFASIPLPIFAAIYCVLYGIVASVGISFIQFANTNSIRNIYVLGITLFLAISVQQYFVTNTAPDGHGPVKTDGGWFNDILNTIFSSAPTVAIIVGTLIDNTLEGKSKAVDRGLPWWGPFQNRKGDVRNDEFYRLPLRINEYMPTRFL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00275 547 Pfam Permease family 54 457 IPR006043 GO:0016020|GO:0022857|GO:0055085
Viun8g00275 547 NCBIfam purine/pyrimidine permease 55 462 - -
Viun8g00275 547 MobiDBLite consensus disorder prediction 1 27 - -
Viun8g00275 547 MobiDBLite consensus disorder prediction 9 27 - -
Viun8g00275 547 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 35 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00275 Viun-Chr8 1765465 1771987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00275 34 543 Organic Solute Cotransporters AT2G34190 59.020 0.0 641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00275 8 1765465 1771987 Viun8g00275 8 1765465 1771987 ECH