Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00265 ATGGGGGTTCAGAATTGTAATGGTTGCAGATCCTGGGAGGAGGACATTTACTGGTCTCATTTTCAATTCCAACATTTCGTGCAGTTTCTCCGAACGGGTTATGATCAACACCTTGCACTTCCGAAGACATTTTCAGATAACTTAAAGAAGAAGCCCCCTGCAAATGTGGCCCTAAAGGGTCCTAGTGGTGTTACGTGGAACGTGGCAATGGTTACTAGAGGAGATACCTTGTACCTTGCATGTGGTTGGGAGCAGTTTGTGAAAGACCACTGTTTGAAGGAGAATGATTTCCTGGTCTTTAAGTACAATGGTGAATCTCAGTTTGATGTTTTAGTGTTTGATGGGGGGAGCTTGTGTGAGAAGGCATGTTCTTATTTTGTTCGCAAATGTGGGCACAAAGAAGCAGAACATGTGGGTGGAAGTCTCAACAAGAAAAGGGACACTACAGAAGATCCTATGAAAGAAGGTCACATCCCTTTAAAAGCTGGTGTGGAATGTGCTTCACCTGGGAAATCGGTGCATGCTAATGGTACCAAGGAACCAATTAATGTCCCTTTTGAAACTCCTACTCCTAGTGAAGAGGCTTTCAATGCTGATGTTGAATCTGCTGGTGCTGAGCAAGTTACATCTGTTGGAGTCCCTCTTTCAGCTGTTCCCAGCGAAACTGCTAATGGGAAAAGGATCAGAAAGCTTGCTTCAGTTGTTAAGCATGTGCAGACCAAACGGAGGGGCAGGGGCAGACCAGCTAAAGTGTCTCATGTTGTAGACAGAGCACTTGACTGGGTTTCTGGACTAGAAGCTGCTGAACCTGTTTCTGCGGTTAGAAGTGCGGCACAAGAGGTATATATTTCAAATAGAAGGCCTGTCACAGATGATGAGATTAAAAATGCCTTAGCATTGGCTCAGGCATCACGCACTGATGACAGTTTGGTTGTAGTCATGCGACCTTCTCACGTCTACAAGAGATTCTTTGTGTCAATGCCCAACAAGTGGATTGGAGAACACATCGCTCCAATGTCTCAAGATGTGATCTTGCGCACGGAAAAGGGTGAATGGGTTGCTAGATACAGCTACCATAATATTCGTCATACTGGTGGACTCACAGGTGGGTGGAAACACTTTGTGTTGGACAACAACCTGGAAGAGTACGATGTTTGTGTGTTTAAACCAGCTGGCCAAATGAACGAGAGCTTGGTCCTTGGTATGACCATTTTCAGAGTTGTTGAGGAGATTGTTCCTCTTTCTGCCATGTCTCCAACAGGAAAAAGAGGAAGAAAACCAGCACAGAATGTTAATCTCACTGAACCATAG 1311 0.4493 MGVQNCNGCRSWEEDIYWSHFQFQHFVQFLRTGYDQHLALPKTFSDNLKKKPPANVALKGPSGVTWNVAMVTRGDTLYLACGWEQFVKDHCLKENDFLVFKYNGESQFDVLVFDGGSLCEKACSYFVRKCGHKEAEHVGGSLNKKRDTTEDPMKEGHIPLKAGVECASPGKSVHANGTKEPINVPFETPTPSEEAFNADVESAGAEQVTSVGVPLSAVPSETANGKRIRKLASVVKHVQTKRRGRGRPAKVSHVVDRALDWVSGLEAAEPVSAVRSAAQEVYISNRRPVTDDEIKNALALAQASRTDDSLVVVMRPSHVYKRFFVSMPNKWIGEHIAPMSQDVILRTEKGEWVARYSYHNIRHTGGLTGGWKHFVLDNNLEEYDVCVFKPAGQMNESLVLGMTIFRVVEEIVPLSAMSPTGKRGRKPAQNVNLTEP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00265 436 ProSiteProfiles B3 DNA-binding domain profile. 23 116 IPR003340 GO:0003677
Viun8g00265 436 CDD B3_DNA 25 114 IPR003340 GO:0003677
Viun8g00265 436 Gene3D - 289 410 IPR015300 -
Viun8g00265 436 SUPERFAMILY DNA-binding pseudobarrel domain 310 394 IPR015300 -
Viun8g00265 436 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 34 410 IPR044837 -
Viun8g00265 436 ProSiteProfiles B3 DNA-binding domain profile. 310 408 IPR003340 GO:0003677
Viun8g00265 436 SMART B3_2 26 116 IPR003340 GO:0003677
Viun8g00265 436 SMART B3_2 310 408 IPR003340 GO:0003677
Viun8g00265 436 CDD B3_DNA 309 406 IPR003340 GO:0003677
Viun8g00265 436 Gene3D - 19 119 IPR015300 -
Viun8g00265 436 Pfam B3 DNA binding domain 36 112 IPR003340 GO:0003677
Viun8g00265 436 Pfam B3 DNA binding domain 311 400 IPR003340 GO:0003677
Viun8g00265 436 SUPERFAMILY DNA-binding pseudobarrel domain 21 114 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Viun8g00265 B3 4.3e-13 CL0405