Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00259 ATGGCGAAATCGAGCGCCGATGACGGCGACCTCCGGCGAGCTTGCGAAGCCGCAATTGAGGATCCGAAGCAGAAGATCGTCATGGCGCTTCGCGTCGCCAAGAGTCACGGCATCTTAGGAAAATCGTCCAAGCTCGGTCGCCAAATGGCCAAGCCTAGGGTTCTCGCTCTCTCCACGAAATCGAAGGGTCAGAGGACATCGGCTTTTCTTCGCGTATTGAAGTATTCTACGGGAGGAGTTCTTGAACCTGCAAAGCTATACAAGCTAAAGCATCTGTCAAAAGTGGAAGTTGTAGCAAATGATCCCAGTGGATGTACATTTACTCTGGGATTTGATAACCTTAGAAGCCAGAGTGTGGCTCCTCCTCAATGGACCATGCGCAATATTGATGACAGGAACCGCCTCCTTCTTTGCATCTTGAACATATGCAAAGATGTTTTGGGTCGCCTTCCGAAGGTTGTCGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCCTCTGTTACTGCTCAGAATAAAGTGCGAGATGGTGGTCCTGTTGCATCATCTGTTGTGAGGGAGGCAGAATTAAAAGTTAATGTTGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATGGAAGCTCTTTTGGGAACTTATGTGATGGGTATTGGTGAAGCAGAAGAATTTTCTGAAAGGTTGAAGAGGGAGCTCCAGGCCCTGGAAGCAGCAAATGTGCATTCTCTTTTAGAAAGTGAACCTTTGATGGATGAGGTTATGCAAGGGCTTGAAGCAGCAACCAGTGTTGTGGAAGATATGGATGAATGGTTAAGCATATTCAATGTAAAACTCCGGCACATGAGGGAGGATATTGCATCAATAGAAACCCGCAATAACAATCTGGAAATGCAATCAGTTAATAACAAATCTCTCATTGAAGAGCTTGATAAGCTTCTTGAGCGGTTGCGTGTCCCTTCTGAGTATGCTGCAAGTTTGACAGGAGGTTCATTTGATGAAGCTCGAATGCTCCAAAATGTTGAGGCATGTGAATGGTTGACTAGTGCCTTGCGTGGCCTTGAAGCGCCTAATCTAGACCCTAGTTATGCAAACATGAGAGCTGTTAAAGAAAAGCGTGCCGAACTTGAAAAATTAAAATCTACTTTTGTCAGGAGAGCATCTGAATTCTTGAGAAATTATTTTGCTAGTTTGGTGGACTTCATGATAAGTGATAAAAGCTACTTTTCGCAGCGAGGACAGTTAAAGAGGCCAGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTGAAGAGTCTCGACAAGAATTGCTTGGGTCCGCTGAGAAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGCAGGGAGGCCCGTGAGTTTGCAAATGAGCTTCGAGCTAGTACTAAAGCATCTAGAAATCCAACTGTTTGGCTCGAAGGTTCTTCAGGTTCTGGTCAAAATGTAAATGCTACTGATACTTCCACAGTCTCTGATGCTTATGCGAAGATGCTTACGATTTTTATCCCACTTCTGGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTTGAAGTCCCTACACTTGTTCCTCCTGGAGGTGTTGTTAATGGAAACAAAACTGGATATGATGATGATGATGATGATTTGGGAATTATGGACATTGATGAGAATGACGGCAAATCTGGCAAAACTTCTGCTGAGCTTGAAGCTTTGAATAAATCACTTAAGGATTTACTTGATGGAATACAAGAAGACTTCTATGCTGTTGTGGATTGGGCATACAAGATTGATCCTTTACGCTGTATATCAATGCATGGAATAACAGAGCGCTATCTATCTGGTCAGAAAGCTGATGCAGCAGGATTTGTGCGTGATTTACTTCGTGACCTGGAGTCTCGGATATCTATGCAGTTCAACCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGAAATGAACGGAATGTTCGCCAAATGGGTGTCCTCTCCTATATTCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATCCAGGGTCAGTCTAGGGATTTGGTTGACCAAGCATATACAAAATTTGTTAGCATAATGTTTGCTACTTTAGAAAAAATTGCACAAACAGAACCAAAGTATGCAGATATTTTTCTTTTTGAGAACTATGCTGCCTTTCAGAATAGTTTGTATGACCTCGCCAACATTGTGCCCACTCTGGCCAAGTTTTATCATCAGGCCAGTGAAGCCTATGAACAAGCTTGTACACGTCATATTAGCATGATAATATACTATCAATTTGAACGCCTTTTTCAGTTTGCTCGAAGGATTGAGGACTTGATGTTCACTGTTCCACCTGAAGAGATTCCTTTTCAGCTTGGACTGTCAAAAATGGATCTTCGGAAGATGTTAAAATCCAGTTTATCTGGGGTGGACAAGTCCATTGCTACGATGTATAAGAAACTGCAAAAGAACTTGACTTCAGAGGAACTATTACCCTCTTTATGGGACAAATGCAAGAAGGAGTTTCTTGATAAGTACGAAAGTTTTGCCCAACTTGTGGCTAGGATTTACCCTACGGAGACAATCCCATCTGTTGCAGAGATGAGAGACCTTTTAGCTTCCATGTAG 2658 0.4323 MAKSSADDGDLRRACEAAIEDPKQKIVMALRVAKSHGILGKSSKLGRQMAKPRVLALSTKSKGQRTSAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVVANDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPSVTAQNKVRDGGPVASSVVREAELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEEFSERLKRELQALEAANVHSLLESEPLMDEVMQGLEAATSVVEDMDEWLSIFNVKLRHMREDIASIETRNNNLEMQSVNNKSLIEELDKLLERLRVPSEYAASLTGGSFDEARMLQNVEACEWLTSALRGLEAPNLDPSYANMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSSGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKTGYDDDDDDLGIMDIDENDGKSGKTSAELEALNKSLKDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRDLLRDLESRISMQFNRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTEPKYADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMFTVPPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIATMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVARIYPTETIPSVAEMRDLLASM 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00259 885 Coils Coil 282 319 - -
Viun8g00259 885 PANTHER SEC3/SYNTAXIN-RELATED 49 878 - -
Viun8g00259 885 Pfam Exocyst complex component Sec3 225 868 IPR019160 GO:0000145|GO:0006887
Viun8g00259 885 Coils Coil 576 596 - -
Viun8g00259 885 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
Viun8g00259 885 Coils Coil 222 249 - -
Viun8g00259 885 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
Viun8g00259 885 Coils Coil 189 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00259 Viun-Chr8 1638777 1654676 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00259 8 1638777 1654676 Viun8g00259 8 1638777 1654676 ECH
Viun8g00259 8 1638777 1654676 Viun9g03545 9 41226890 41239481 PCT