Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00253 ATGGGAAGAGAGCCACCTGAGTCTCGTTGCCTAACAGATATGGAGTCAGACAGGATCAGTTATCTACCGGGTCATGTAATAGACCAAATTTTGTCACATTTGTCAATTAAGGAAGCAGTGAGAACAAGTGTTTTATCTAGCAAATGGAGGTACAAATGGGCCACGCTACCGAATCTCGTGTTCGATAACGAATGTGGCTCTGCGGTTACTCAGGACCATATGATTGTAAAGAACAAGTTTTTGAGAACCGTTGATCATGTACTGCTACTTCATTCCGGGCCAATCAACAAGTTCAAACTCTCCCATCGTGATCTCCTTGGTGTGACTGATATTGATCGTTGGACGCTTCATGTATCCAGAAAATCTGTTAAAGAGTTTGTGCTGGAAATCTGGAAAGGACAGCGGTATAAGATACACTCATGTTTATTTTGTTGTCAGAGTTTGACTCATTTAGAATTGTTTAATTGTTGGCTTAAACCTCCATCTACATTTAAAGGCTTCAAGAACTTAAAGAGTCTTGATCTGCAACATGTTACCTTGGCTCAGGATGTTTTTGAAAACTTGATATCCAGCTGCCCAGTACTTGAACGATTGACATTGATGAACTTTGATGGTTTCACTCATCTTAATATTGATACACCGAATCTCCTGTTTTTTGACATTGGGGGTAAATTTGAAGATATTAGCTTTGAGAATACTTTCCAATTAGCAGTGGTATCAATTGGTTTGTATGTGAACTTTGAAATCTATCAAAGTAGATTTCATGGAGGCTCTAGCAATTTGCTCAAATTTTTTGTTCATCTTCCGCACCTGCAAAGGCTAGAGATACAGAGCTATTTTCTAAAGTATTTGGCAGTGGGGGTTGTGCCAATAAATCTTCCAAGACCGTGCATTGATCTAAGTTATCTTTCTATACGAATAAACTTAAATGATTTGAAGGAAATCTCAGCTGCTCTTTGCCTCCTAAGAAGCTCCCCTAATCTACAAGAACTAGAAATATTGGCTCGACAGGAGGATCAGACTCTTCTGATAACGCACAACTATTGTTGGGAAGATGTGTTTTTTGCTTGTCCAGAGATGATGCATATGAGAAATGTGAAGATAGATGGCATATCTGGTATCAAACCTGAATTGGATTTTATCAGCTTTCTACTTCTACACTGTCCTGTGTTGGAAAGGATGACTGTGATTCCTGTTTTAAACATCGGAACAGAACTGATGAAACAACTGCTGCGGTGTAGGAGAACCTCAAGACAAGCTGAAATTATTTACCTGGACCCTTAG 1284 0.3925 MGREPPESRCLTDMESDRISYLPGHVIDQILSHLSIKEAVRTSVLSSKWRYKWATLPNLVFDNECGSAVTQDHMIVKNKFLRTVDHVLLLHSGPINKFKLSHRDLLGVTDIDRWTLHVSRKSVKEFVLEIWKGQRYKIHSCLFCCQSLTHLELFNCWLKPPSTFKGFKNLKSLDLQHVTLAQDVFENLISSCPVLERLTLMNFDGFTHLNIDTPNLLFFDIGGKFEDISFENTFQLAVVSIGLYVNFEIYQSRFHGGSSNLLKFFVHLPHLQRLEIQSYFLKYLAVGVVPINLPRPCIDLSYLSIRINLNDLKEISAALCLLRSSPNLQELEILARQEDQTLLITHNYCWEDVFFACPEMMHMRNVKIDGISGIKPELDFISFLLLHCPVLERMTVIPVLNIGTELMKQLLRCRRTSRQAEIIYLDP 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00253 427 ProSiteProfiles F-box domain profile. 16 50 IPR001810 GO:0005515
Viun8g00253 427 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Viun8g00253 427 SUPERFAMILY RNI-like 137 394 - -
Viun8g00253 427 Gene3D Ribonuclease Inhibitor 89 427 IPR032675 -
Viun8g00253 427 PANTHER F-BOX PROTEIN-LIKE 17 398 - -
Viun8g00253 427 Pfam F-box domain 20 51 IPR001810 GO:0005515
Viun8g00253 427 SUPERFAMILY F-box domain 16 60 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00253 Viun-Chr8 1602275 1605397 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00253 8 1602275 1605397 Viun8g00253 8 1602275 1605397 ECH