Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00248 ATGTCCAATTCAAAATCAGCACACTTTCTAAAAACTCTCACCCTCTTCTTCTTTTTTTTCTCGTGTGTGTCTTCCACAAACACCTTCTTCACCCTACAATTCAAAGAAGCACCTCAATTCTACAACTCTCCAAAATGTCCTTCTCTCTCCGACAACCTATTATGCTCCGAAGAAGCTGTCCACGTGGCAATGACGCTGGACACGACATACATCCGAGGTTCAATGGCGGCGATCCTCTCCGTCCTCCAACACTCCTCCTGCTCCCAAAACGTCTTCTTCCACTTCGTATGCTCCTCCCACGCGTCCCTCCTACGCGCCACCATCGCCACCTCCTTCCCCTACCTCAATTTCCAAATCTACCCCTTCCACGACCACCTCGTTTCCGGCCTCATCTCCACCTCAATCCGCGCCGCACTCGATTGCCCCCTCAACTACGCGCGCAGCTACTTCCCCACCTTAATCCCACGCTGCGTCAAGCGCGTCGTCTACCTCGACTCCGACCTCGTACTGGTCGACGACATCGCCAAGCTCGCAGCCACGCCGCTGGGAGAACACAGTGTGCTGGCGGCGCCGGAATACTGCAACGCCAACTTCACCTCCTACTTCACGCCCACGTTCTGGTCCAACCCTTCGCTCTCGCTGACGTTCGCGGAGCGGAGGGCCTGTTACTTCAACACGGGGGTGATGGTGATCGATTTGGAGCGGTGGCGCGTGGGGGAGTACACGAGGAAGATCGAAGAGTGGATGGAGGTTCAGAAGAGGATGAGAATCTACGAACTGGGTTCGTTGCCGCCGTTTTTGCTTGTTTTTGCGGGGAACATTGTTCCGGTGGATCATAGGTGGAACCAGCACGGTCTCGGAGGAGACAACTTTCGTGGTCTGTGTCGGGATCTTCACCCTGGTCCTGTTAGTTTGTTGCATTGGAGTGGGAAGGGTAAACCCTGGGTCAGATTGGACGCTAATAAACCTTGTCCTCTCGATGCTCTTTGGTCACCTTATGATCTTTTACGCACCCCATTTTCTCTCGATTCTTAA 1035 0.5382 MSNSKSAHFLKTLTLFFFFFSCVSSTNTFFTLQFKEAPQFYNSPKCPSLSDNLLCSEEAVHVAMTLDTTYIRGSMAAILSVLQHSSCSQNVFFHFVCSSHASLLRATIATSFPYLNFQIYPFHDHLVSGLISTSIRAALDCPLNYARSYFPTLIPRCVKRVVYLDSDLVLVDDIAKLAATPLGEHSVLAAPEYCNANFTSYFTPTFWSNPSLSLTFAERRACYFNTGVMVIDLERWRVGEYTRKIEEWMEVQKRMRIYELGSLPPFLLVFAGNIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANKPCPLDALWSPYDLLRTPFSLDS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00248 344 Pfam Glycosyl transferase family 8 61 317 IPR002495 GO:0016757
Viun8g00248 344 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 61 324 IPR029044 -
Viun8g00248 344 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Viun8g00248 344 FunFam Hexosyltransferase 61 324 - -
Viun8g00248 344 SUPERFAMILY Nucleotide-diphospho-sugar transferases 60 335 IPR029044 -
Viun8g00248 344 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 21 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00248 Viun-Chr8 1569881 1571471 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00248 8 1569881 1571471 Viun8g00248 8 1569881 1571471 ECH