Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00239 ATGGCCTCTGACGGAGCTACTTCGGCGGCAGCGGCGGCGGCGAGTAGGAGAAAGCCGTCGTGGAGGGAGAGAGAGAATAACCGAAGGAGAGAACGGAGGAGAAGAGCGATCGCGGCGAAGATATACTGTGGACTTCGAGCTCAGGGGAACTATAACTTGCCGAAGCACTGTGACAACAACGAAGTTCTCAAAGCGCTTTGTGCCGAAGCTGGTTGGTGCGTCGAAGAAGACGGCACTACCTATCGGAAGGGTTGCAAGCCACCTCTGGCCAATGGTGCAGGGAGCTCAATGAGAAACGTTCCCTTTTGCTCTTCACAAAGCCCGAGTCCTTTTTCTTCGTCGTATCCCAGTCCAATTCCTTCATACCAAGTGAGTCCTTCTTCCTCCTCTTTCCCAAGCCCGTTTCGGTTAGATGTGGATAAGGACAATGTATCAAACCTCATTCCGTACATTCGCAATGCGTCCCTGTCTCTTCCTCCTCTGAGGATATCAAACAGTGCCCCTGTGACGCCGCCTCTTTCATCACCTACGTCAAGAAATCCGAAACCAATTCCTACATGGGAGTCCATTGCCAAAGAATCCATGGCTTCCTTCAATTACCCTCTCTTTGCAGCTTCTGCTCCTGCCAGCCCCACTCACCGTCATCTTTACACTCCGGCCACTATTCCAGAATGTGATGAGTCTGATACTTCCACCTGTGAGTCTAGCCAGTGGATGAAATTCCAAGCATTTGGTCCTTCTGCATCTACGTTACCAGCTTCTCCTACTTTCAATCTTGTTAAACCTTTGGTTCCTCACGGTGTGCCTGATAACTCAATCCAAGAGATGAGGACGAGTTCAGAAGAGTTTGGGGTACAGGTAAAACCTTGGGTTGGGGAAAAAATTCATGAAGTGGCATTGGATGATTTGGAACTAACGCTTGGAAGCGGGAAGGTGCGGAGTTAG 945 0.5026 MASDGATSAAAAAASRRKPSWRERENNRRRERRRRAIAAKIYCGLRAQGNYNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGCKPPLANGAGSSMRNVPFCSSQSPSPFSSSYPSPIPSYQVSPSSSSFPSPFRLDVDKDNVSNLIPYIRNASLSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMASFNYPLFAASAPASPTHRHLYTPATIPECDESDTSTCESSQWMKFQAFGPSASTLPASPTFNLVKPLVPHGVPDNSIQEMRTSSEEFGVQVKPWVGEKIHEVALDDLELTLGSGKVRS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00239 314 Pfam BES1/BZR1 plant transcription factor, N-terminal 15 154 IPR008540 -
Viun8g00239 314 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 14 313 IPR033264 GO:0003700|GO:0006351|GO:0009742
Viun8g00239 314 MobiDBLite consensus disorder prediction 1 32 - -
Viun8g00239 314 MobiDBLite consensus disorder prediction 17 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00239 Viun-Chr8 1480962 1483096 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Viun8g00239 BES1_N 1.2e-61 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00239 8 1480962 1483096 Viun8g00239 8 1480962 1483096 ECH
Viun8g00239 8 1480962 1483096 Viun9g03557 9 41324699 41327058 PCT