Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00222 ATGGCTGAACAACGCGCCACCTCCGACACTCGCCACCACCTCTCCGTCGCACCGCCATTGCAGATCTCCAAAGATGTCCAAGGATCTGACAATTCCATTCCACTCTCACCACAGTGGCTTCTGCCAAAGCCGGGGGAGAATAAACTTGGAACAGGATCTGTGGAGAACCACATGGTCTCAAACCCACCTTATGGCCATCGCTCGGAGACTGTCAAGACATCTGGAAATGGAGAGGATGTGCATGATGTCCATAAGAAAAAGGATGTCTTTAGGCCATCCATGTTTGACTCAGAAAGTGGACGTCGTGATCGTTGGCGTGATGAGGAGAGAGACACCAAATCCTCCATTCGGAAGGATCGTTGGAGAGATGGAGACAAAGACCTAGGTGATTCTCGCAGAGTGGAACGGTGGACAGATAATATGTCTGCAAGGAACTTTGCTGAAGCACGGCGTGGTGCAACTGATAATCACAGATGGAATGATTCAGGAAACAGAGAAACTAACTTTGATCAGCGGCGTGAAAGTAAGTGGAACACTCGCTGGGGTCCTGATGACAAGGAGCCAGAAGGCATCCGTGAAAAGTGGAGTGACTCTGGAAAAGACGGTGATATACATTTGGAAAAAGGTCTGACTAACATTTCCAGTCAGGGAAAGGATGAGAAGGAGGGAGAACACTATCGGCCATGGAGACCTAACTACTCACAAGGCCGTGCAAGGGTAGATCCTTCCCATACAACCCCAAACAAACCAGTGTCTACATTTTCCTATGGGCGTGGTCGTGGGGAGAATACACCCCCAGTTTCTAGTATTGGACATGGCCGGACTGGTTCTCTTGCTAGCTCTATGAGTAGCACATACTCTGGAGCTACATTGGAAAAGGTTCAAAGTGGACTTGAAGAACTGAACCCCTTTAGATATAACAGGACAAAATTGCTGGATGTGTACAGAGTGACTGGTATGGGTACAAATAGAAAACTAGTTGATGATTTTGTGCAGGTACCTAATCTTACTCAGGATGAACCCTTGGAGCCTCTAGCTATTCTGGCACCAAATCCTGAGGAACTGGCTGTCTTGAATGGAATTGACAAAGGGGAGATAATTAGCAGCAGTGCTCCTCAGGTTCCAAAAGATGGAAGGTCAACAGATTTTACTCACACAAGAAGAATGAAGCCTGGAAGTGGACCTTTCCAAGATAGAGGTGAAGATGGAGGTTCTTACAAAGTGCCTGAAGAGGTTTCCAGTAATAAAGATTCATCATTTGAAGGAAATACTTCTGTTCATCCTGGTGCTTCATGGCGAACAATGCCACTTGGTGACCATGCTGCCCAGTTTCACGATGGTAGAGATGTAACTAGTGATGTTAGATTGAGAAAAACAGATCTGAACTCACACCAGCCAAAAGATCCTCATAATCAGTGGGAAAATAATTTGGGTTATTTATCTGACTCCAAAGATGTAGGTAAGTGGCAAGCTAGTGAAGATCCTGTTATTAAGAGGCAGTTGTCTGGCATTTTGGACAGCGAACTTGAAATCAGAAGAGTTCAACAGACTGTTCCAGAGGAGTTATCCCTTTTGTATAAAGATCCTAAGGGTCTAATCCAAGGTCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGGTATTTTGGTATTGATTTACCTGTTCGCCTGGAAAATTCAGCAGCTGACTCACCATGGTTGTCTCTTGGTGATGCCATGCCCCATTTACGAGCTAAAGCTCGACCTCCACCTGGGTTTTCTACACCAAAGCCAAATGACTTAACAGATATTCCTGGACGGCAAATTTCCAGTACATTTGGGAGTACTCATACTGGTTTGAATGAGCTTGACATTTTGCGTGGTGATTCTAGGCATCGTCAGAATCCTGATACCGAAGCTGAAAATAGGTTTCTGGAGTCACTTATGTCTGGTAGCAAGAACAGTCCTCCCCTTGATGGCCTGGCATTGTCAGAAGGTTTGCAAGGATTTGTTGGAAATAATCCTGGTAATATGGGTCCATCAGCGGTTGATAATGGAAATAATCTTTACTTGCTTGCTAAGAGGATGGCACTTGAACGACAACGGTCCTTGCCTAGTCCCTACCCATACTGGCCAGGGCGTGATGCAGCTTCGTTTGCTCCAAAACCGGATGTTGTCCCAGATGCCTCCTTGCATTCTAAACTATTGTCTTCAGTGAGTGATAACTCTCGGCAACCTCAATCCCAAAATTCCGAGTTAATGTCAATCATCCAAGGTTTATCCGATAGGACATCTGCAGGTCTAAATAATGGTGCTGCTGGCTGGCCTGGTTATCCCTTACAAGGTGCATTGGATCCCCTACAGAATAAAATTGATTTGCTTCATGATCCTAATTTTCCTCAAATGCCATTTGGAATTCAGCAGCAAAGGCTGCCTGCACAAAACCAGTTGTCTTTAAGCAATTTATTGTCTCAAGCTGCTGCTGATAACCCAAATAACGCTTTGACAGCGGAGAAGCTACTTTCTTCAGGTTTATCACAAGATCCTCAGATATTAAATATGTTGCAACAGCAGTACTTGTTGCAACTGCATTCTCAAGCGGCTGCTCAATCACAGCAGATCCCCTTGATTGATAAACTCCTATTGCTGAAGCAACAACAGAAGCAGGAGGAGCAGCAGCAGCTACTACGGCAACAACAACTGCTTTCTCAAGTGTTGCAAGACCAACCGTCTAGCCAGCTCTTCAGTAATTTATCTTATGGACAGTTGCAAGGTGTATTACCGATGGGTAATTTGCGTGTGGATCCTTCTCTAGTTCAACCACAACAGGAGGTTTTTCCCATGAGCTCTCAGACAGCAATCCCCAATGTGCATAATGAGCATAATTCTAATTCTTTGAATCTACCACCTAAAGTTAGTCAAGATACAAGTTCTAATGTAAGCAGCCAAGCTTCTATACGTCTTCGACACCAATTATTTGGCGATACTCGTCCAGAAAATTGGGGCCCTAATCTTACTGAACAAATTATTGATCAGTATCAGAAGGAGTCATTTCCAGTATCATCAACTCAGGTTGATGGTTCTGCATTGCTTGATCAGAACAGATCCAAAGAGGAACCACTCATTCCATCTCTTTCTCCTTCTGATTACGCTGCTAAGTCAGTGGAACAGGTGCAGCCAAGCAATTTTAGGCCTGATGCCGTGGTTGTGACCTCAACTTCTAAGCCTGGGGAAAGTTCTGGAAATGTGGAGTCTTTTGCATCCAGCATCGCCTTATCTACAGCTGTATCTAGTGTGTCACCACCGGTGAGTGGTCCTGGTACGGAGGTGAAGACCAAATTGGATATTGTGCATCAAGAGCAACATGCTGGGAAGGACAGCACTATATCCGAGCCTTCTCTGGGAGATATGAGAAAGATTGAACCTCAAGAACCTAAAAAGGCTAGTGAGAAGAAATCTAAGAAGCAAAAATCAACCAAATCTCAGTCTTTTGATCAAACAAAGGGAGTGGTAAAAAATTTGACTTTGCAGCCATCAAAGCAGTCGGAAACTGAAATGGCGAAGTTAAGTGATTTTAGGGAAGCTAAGATTGACGAATCGTTAAATGATACAAATATGCAACAAACAAGAGTTAAGGGAACTCGGACTGGAAGTGCTGTCCCAGAGACTGGTGATGATCACCAACAAGCTGGTGGTTGGTCTGGTATTATTACTGGAAAGATAACTGAAGCAGTTGATGCAGGTGAGATCAATTCAACTACTCTTTTGACACAAAAAACTGAGGTACCTGCCGGACGGGCTTGGAAACCTGCTCCAGGTGTCAAAGCGAAATCTTTCTTAGAAATTCAACAGGAAGAAAAAAGGAAGGCTGAGACTGAAACACTTGTATCTGATGTTGCTGTTTCTGTCAATTCAATGACCCTAGCAAGTCCTTGGGCTGGGATTGTGGCCAATCCTGACTCCTTGAAGGTATCTAGTGAAGGTGTCAAAGAAGGGCGCAATACCGAGAATCATGTTAAGTCTGAAACTTCTCAAAATGTCAAGAGCAAGAAAAGTCCTCTGCATGATCTATTAGCTGAAGAAGTTCTAAAGAAATCTAATGAAATAGATGCTGAGATTCCAGATAGTATATTGCCCTCACATAATATAGTTGTACAGTCGGAATCATTGGATGACGGCCATTTTATTGAGGCGAAAGACACTAAAAGAAGCCGAAAAAAGTCAACAAAATCGAAGGGTTCAGCAACTAAAGCTTCATTGCCCATTGCATCATCTGATGTACCTATAGCTTCAAGCCCCAATGAAAAGGGAAAAAACTCCCGTTTGGCACAGCAGGAAAAGGAAGAGTTGCCTGTCATCCCCGCAGGACCCTCTTTTAGTGATTTTGTTCTTTGGAAAGGAGAGCGAGAACCACCAAGCTCGTCTCCTTCTCCAGCATGGTCTACTGATTCCGGTAGGGTTCCAAAACCTACTTCATTGAGGGACATTCTAAAGGAGCAGGAGAAAAAGGCCTCTTCTGCAATTCCTGTTAGCCCAGTGCCTCCGCCTCCAAAATCTCAGCCTACCCAGTCTACACGGAGTAATGCTTCTTCATGGTCGGTTTCTGCATCCTCTCCATCTAAAGCTGCTTCTCCAATTCAGATAAATACCCAAGCTTCTCAATCAAAATACAAAGGGGATGATGATTTGTTCTGGGGTCCAATGGAGCAATCTAAGCAAGATGCTAAGCAGTCTGATTTCCCTCAGCTTGCTAGCCAAGGGAACTGGGGTTCAAAAAACGTAACCTCGAAAGGTAATTCCCCCGGACTATTGACGAAACAGAAATCAGTGAGTGGTAAACAAGCTGAACGGTCTCTAGCATCATCTCCTGCCTCTTCTCAATCAATGCTGAAATTGAAAAAAGATGCCATGACAAAGCATTCTGAAGCCACGGATTTTAGAGATTGGTGTGAGAATGAGTGTGTTAGGCTTATTGGCTCAAAAGATACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCGGAAGCTGAACTGCTCCTCATAGAAAACCTTGGATCATATGATCCCGAGCATGAATTCATTGATAAGTTCCTGAATTACAAGGAGTTGTTACCATCGGATGTTTTGGATATAGCTTTTCAGAGTAAGAATGAGAAGAAAGTTGGTGGACATGGTGCATCATGGACAGCTTCAGGTAATGCAGACACACAGGATGTTGACTACTCTGAAGGATCCTCTAAAGGTGGTGGTGGAAAGAAGAAAGGTAAGAAGGGGAAAAAGGTGAGCCCTTCAGTTTTGGGATTTAACGTTGTGAGTAACCGTATCATGATGGGTGAGATCCAAAGTGTAGAAGATTAA 5346 0.4405 MAEQRATSDTRHHLSVAPPLQISKDVQGSDNSIPLSPQWLLPKPGENKLGTGSVENHMVSNPPYGHRSETVKTSGNGEDVHDVHKKKDVFRPSMFDSESGRRDRWRDEERDTKSSIRKDRWRDGDKDLGDSRRVERWTDNMSARNFAEARRGATDNHRWNDSGNRETNFDQRRESKWNTRWGPDDKEPEGIREKWSDSGKDGDIHLEKGLTNISSQGKDEKEGEHYRPWRPNYSQGRARVDPSHTTPNKPVSTFSYGRGRGENTPPVSSIGHGRTGSLASSMSSTYSGATLEKVQSGLEELNPFRYNRTKLLDVYRVTGMGTNRKLVDDFVQVPNLTQDEPLEPLAILAPNPEELAVLNGIDKGEIISSSAPQVPKDGRSTDFTHTRRMKPGSGPFQDRGEDGGSYKVPEEVSSNKDSSFEGNTSVHPGASWRTMPLGDHAAQFHDGRDVTSDVRLRKTDLNSHQPKDPHNQWENNLGYLSDSKDVGKWQASEDPVIKRQLSGILDSELEIRRVQQTVPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSAADSPWLSLGDAMPHLRAKARPPPGFSTPKPNDLTDIPGRQISSTFGSTHTGLNELDILRGDSRHRQNPDTEAENRFLESLMSGSKNSPPLDGLALSEGLQGFVGNNPGNMGPSAVDNGNNLYLLAKRMALERQRSLPSPYPYWPGRDAASFAPKPDVVPDASLHSKLLSSVSDNSRQPQSQNSELMSIIQGLSDRTSAGLNNGAAGWPGYPLQGALDPLQNKIDLLHDPNFPQMPFGIQQQRLPAQNQLSLSNLLSQAAADNPNNALTAEKLLSSGLSQDPQILNMLQQQYLLQLHSQAAAQSQQIPLIDKLLLLKQQQKQEEQQQLLRQQQLLSQVLQDQPSSQLFSNLSYGQLQGVLPMGNLRVDPSLVQPQQEVFPMSSQTAIPNVHNEHNSNSLNLPPKVSQDTSSNVSSQASIRLRHQLFGDTRPENWGPNLTEQIIDQYQKESFPVSSTQVDGSALLDQNRSKEEPLIPSLSPSDYAAKSVEQVQPSNFRPDAVVVTSTSKPGESSGNVESFASSIALSTAVSSVSPPVSGPGTEVKTKLDIVHQEQHAGKDSTISEPSLGDMRKIEPQEPKKASEKKSKKQKSTKSQSFDQTKGVVKNLTLQPSKQSETEMAKLSDFREAKIDESLNDTNMQQTRVKGTRTGSAVPETGDDHQQAGGWSGIITGKITEAVDAGEINSTTLLTQKTEVPAGRAWKPAPGVKAKSFLEIQQEEKRKAETETLVSDVAVSVNSMTLASPWAGIVANPDSLKVSSEGVKEGRNTENHVKSETSQNVKSKKSPLHDLLAEEVLKKSNEIDAEIPDSILPSHNIVVQSESLDDGHFIEAKDTKRSRKKSTKSKGSATKASLPIASSDVPIASSPNEKGKNSRLAQQEKEELPVIPAGPSFSDFVLWKGEREPPSSSPSPAWSTDSGRVPKPTSLRDILKEQEKKASSAIPVSPVPPPPKSQPTQSTRSNASSWSVSASSPSKAASPIQINTQASQSKYKGDDDLFWGPMEQSKQDAKQSDFPQLASQGNWGSKNVTSKGNSPGLLTKQKSVSGKQAERSLASSPASSQSMLKLKKDAMTKHSEATDFRDWCENECVRLIGSKDTSFLEFCLKQSRSEAELLLIENLGSYDPEHEFIDKFLNYKELLPSDVLDIAFQSKNEKKVGGHGASWTASGNADTQDVDYSEGSSKGGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQSVED 1781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00222 1781 ProSiteProfiles GYF domain profile. 521 572 IPR003169 GO:0005515
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1132 1156 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1111 1228 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 214 228 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 411 430 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 368 436 - -
Viun8g00222 1781 Gene3D - 506 587 IPR035445 -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 22 36 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1717 1758 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 150 207 - -
Viun8g00222 1781 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1781 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1517 1552 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 72 131 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1181 1195 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1157 1180 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1196 1211 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1 131 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1566 1627 - -
Viun8g00222 1781 SMART gyf_5 522 577 IPR003169 GO:0005515
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1469 1483 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 238 259 - -
Viun8g00222 1781 Pfam GYF domain 526 570 IPR003169 GO:0005515
Viun8g00222 1781 MobiDBLite consensus disorder prediction 148 281 - -
Viun8g00222 1781 SUPERFAMILY GYF domain 515 578 IPR035445 -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1725 1739 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1383 1631 - -
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1321 1349 - -
Viun8g00222 1781 CDD GYF 521 578 IPR003169 GO:0005515
Viun8g00222 1781 MobiDBLite consensus disorder prediction 1408 1434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00222 Viun-Chr8 1396193 1404290 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00222 8 1396193 1404290 Viun8g00222 8 1396193 1404290 ECH
Viun8g00222 8 1396193 1404290 Viun9g03571 9 41390783 41399469 PCT