Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00206 ATGGCCTCAAGCTCAGTTTGGACAACAAAGCAGAACAAGAAGTTTGAGAATGCTTTGGCCATCTACGACAAGGACACCCCAGATAGGTGGCAGAACTTGGCCAGAGCAGTGGGAGGAAAAACAGTGGAAGAAGTGAAAAGGCACTATGAGATGCTTGTTGATGATTTGAAGCAGATTGAGGAAGGTCGTGTACCCTTGCCCAATTACAGAAAAGTTGCTGCTGCTGCATCAGAAGCAGGCACCATCAGAGGTTACAGTTACATCAACGAAGAACAAAGGATGAAAGTCCTAAGCCTCAGGTGA 303 0.4653 MASSSVWTTKQNKKFENALAIYDKDTPDRWQNLARAVGGKTVEEVKRHYEMLVDDLKQIEEGRVPLPNYRKVAAAASEAGTIRGYSYINEEQRMKVLSLR 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00206 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 78 IPR044636 GO:0003700
Viun8g00206 100 SMART sant 3 55 IPR001005 -
Viun8g00206 100 Gene3D - 1 66 - -
Viun8g00206 100 CDD SANT 7 53 IPR001005 -
Viun8g00206 100 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Viun8g00206 100 ProSiteProfiles SANT domain profile. 2 52 IPR017884 -
Viun8g00206 100 FunFam Transcription factor SRM1 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00206 Viun-Chr8 1300917 1301987 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun8g00206 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00206 8 1300917 1301987 Viun8g00206 8 1300917 1301987 ECH
Viun8g00206 8 1300917 1301987 Viun9g03583 9 41452953 41454145 PCT