Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00202 ATGACCACCGGAGGAGGAGGAGGAGGAGGAGGAGCCGTCGGCGGCTCCGCAGTGGGAGTTCAGATCCAGCAGCAGAGCCGAATGGCGCTCCCAGATTTCCTTCAGAGCGTGAATCTCAAGTACGTGAAATTAGGTTACCACTACTTGATCTCCAACCTCTTAACCCTATTTCTAGTTCCTTTGATCCTCGTCACGCTAATCCAGGTCTCCCAGACCACCGACCTCCACCACCTCTGGCTCCACCTCCAGTACAACCTCCTCACCATCCTCACCTGCTCCGGCGTCCTCGTCTTCGGCCTCACGCTTTACGCCGTCACGCGCCCACGCGCCGTCTATCTTCTAGACTCCGCCTGCTTCCGCCCCGCCGACCACCTCAAAGCCCCCTTCCGGAGTTTCATGGACCACTCCCGCCTCACGGGAGACTTCGAGGAGTCGTCCCTGGATTTCCAGCGCAAGATCCTCGAACGCTCTGGGCTCGGGGAGGAGACCTACGTCCCCGAGGCCATGCACTCTATTCCGCCGCAGCCGTCCATGGCTGCGGCCAGAGCGGAGGCGGAACAAGTCATGTTTGGTGCCTTGGATAATCTCTTCCAAAACACCAGCCTTAAGCCTAAGGATATTGGTATTCTTATTGTGAATTGTAGCTTGTTTAACCCTACGCCCTCGCTCTCCGCCATGATTGTTAACAAGTACAAATTGAGAGGGAACATTAGGAGCTTTAATTTGGGAGGGATGGGGTGCAGTGCTGGGGTTATTGCGGTTGATCTTGCAAAGGACCTTTTGCAGGTTCATAGGAACACTTATGCCGTGGTTGTTAGCACCGAGAACATTACTCAGAATTGGTACTTTGGGAACAAGAAGTCCATGCTCATCCCCAATTGCCTCTTCCGGGTCGGCTGCTCCGCCCTGCTGCTGTCGAACAAGCCGGCCGATCGGAGGCGGGCCAAGTACCGGCTTGTCCATGTTGTGAGGACTCATCGCGGTGCTGATGACAAGGCGTTCCGGTGCGTTTACCAGGAGCAGGATGATGCTGGCAAGACTGGAGTTTCTTTGTCAAAGGATTTGATGGCGATTGCTGGTGGAGCACTGAAAACCAACATCACCACACTTGGTCCTTTGGTGCTGCCAATCAGTGAGCAGCTTCTGTTTTTTGTGACTTTGCTGATGAAGAAGTTATTCAAAGCTGATGTGAAGCCTTACATACCGGATTTCAAGCTTGCTTTTGATCACTTTTGCATACATGCTGGAGGCAGGGCTGTGATTGATGAGCTGGAGAAGAACCTGCAGCTGCGTCCTGAGCATGTGGAGGCTTCTAGGATGACCCTGCACCGGTTTGGGAACACTTCCTCTAGCTCCATTTGGTATGAACTGTCTTACATTGAAGCCAAAGGGAGGGTGAAGAAGGGCAACAGGGTTTGGCAAATTGCATTTGGAAGTGGTTTCAAATGTAACAGTGCTGTTTGGCAGGCACTGAGAAATATTAAGCCTTCTCCTAATGGACCATGGGAAGATTGCATCGATAAGTATCCTGTGGAAATTCTCACATAG 1548 0.5265 MTTGGGGGGGGAVGGSAVGVQIQQQSRMALPDFLQSVNLKYVKLGYHYLISNLLTLFLVPLILVTLIQVSQTTDLHHLWLHLQYNLLTILTCSGVLVFGLTLYAVTRPRAVYLLDSACFRPADHLKAPFRSFMDHSRLTGDFEESSLDFQRKILERSGLGEETYVPEAMHSIPPQPSMAAARAEAEQVMFGALDNLFQNTSLKPKDIGILIVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDLLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSALLLSNKPADRRRAKYRLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFVTLLMKKLFKADVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLRPEHVEASRMTLHRFGNTSSSSIWYELSYIEAKGRVKKGNRVWQIAFGSGFKCNSAVWQALRNIKPSPNGPWEDCIDKYPVEILT 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00202 515 Gene3D - 131 490 IPR016039 GO:0016746
Viun8g00202 515 PANTHER 3-KETOACYL-COA SYNTHASE 80 512 IPR012392 GO:0006633|GO:0016020|GO:0016747
Viun8g00202 515 CDD CHS_like 95 488 - -
Viun8g00202 515 SUPERFAMILY Thiolase-like 97 315 IPR016039 GO:0016746
Viun8g00202 515 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 408 489 IPR013747 -
Viun8g00202 515 PIRSF Very_long_ch_3-ktacl-CoA_syn 32 515 IPR012392 GO:0006633|GO:0016020|GO:0016747
Viun8g00202 515 SUPERFAMILY Thiolase-like 320 489 IPR016039 GO:0016746
Viun8g00202 515 FunFam 3-ketoacyl-CoA synthase 121 490 - -
Viun8g00202 515 Pfam FAE1/Type III polyketide synthase-like protein 103 392 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00202 Viun-Chr8 1287643 1289730 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00202 8 1287643 1289730 Viun8g00202 8 1287643 1289730 ECH