Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00198 ATGAGTTGGAGAACCATAGCTTCCACTTCAAGACACACCTTCAAGAGACTCAATGCCATCTTCCGATCCCATTCCGCCACCTTCCCTTCTCCGCACCACTCACGCGCCTCATTTCCCGCCTTCCTCCACGCGCCGTTCACCACCACCACCACCACCCCTCACTCCTCCCAACCCACCAACGCCCTCATCGACCCCAAACTCCATGCCACGCAAAACGACGCCGTCGTCGACGACGAAGATGCCACGAACGAGTTTCTATCGCGATTTGTGTGGATAATGCGGAAGAAGGTGAAGGAAGCGTACCCGGAATCCGACAAGGCCACCGTGGATGGCATGCTCGTGGCGATCGTGGAGAGGGTTACGGCGGAGATGGAAAAGGGCAGGGGAGTTGAAACGGCGTCGTTGGGTTCGGGGGATTTCAGCGAGGATTTGTGGGGAACGGTGTGGGAGGTGAGCAATATGGTGTTGGAGGACATGGACAAGGAGAGGAAGAAGGAGAAAATGAAGGGCTTCTTGCAGTGCGAAGAGGTTAAGGAAATGTGCAGATTCGCCGGTGAAGTTGGCATTCGCGGCGATTTGCTTAGGGAGCTTAGGTTCAAGTGGGCGCGTGAGAAGATGGAGGAGCATGAGTTCTACGAAGGTTTGGAGAAAATGAGGAAGGAAAGTGATGTTGGTGAGGAGGGGAAGAAGGAAAATGTTGCTGTTGGACTTCCCAAGAGGAAAGGGAAGATAAGGTACAAGATTTATGGGCTTGATCTCTCTGATCCCAAGTGGGCACAAGTGGCTGAAAGGATCCATGAGGCAGAACAGGTGTTTTGGCCGCAGGAGCCGAAGGCAATTACGGGGAAAGCTAAGGTTGTTAGGTCGAAGATTCTGTCGTCGAAGGAGGATGATGATGATGTTTTGCAAAGCCTGTTGAATGAGTTTGTGGAGCTTGTTGAACCTAGCAGGGTGGAATGGATAGATTTGCTTGACAACCTGAAAGAGCAGAATCGTAGTCTGTACTCGAAGGTGGCTGAAATGATATTGGCTGAAGATTCTTTCCAAACAAATGTCTCTGACTACTATAGGCTTATTGATACCTATGCTAAAGAGGACTGCTTTGATGATGTTGAGAGATTGTTGAAGAAGATGAGGGAAAATGGTATACAACTAGATGCTTCAACGGCCAGTGTGTTGGTCCACATGTACTGCAAGGGAGGCAATCATGACCGTGCAAATGAAGCATTTGAAACCTTGAAGGGACTGGGTTTCCAACCGGACTTCCAAGTCTTCAATTCAATGATCATGGCATATGTGAATAATGGCGAGCCTAGTTTGGGCGAGAAATTGATGAGGGAGATGGATTCAGGAAATATTAAACCAACGGAGGAAATATACATGGCATTGCTCCGATCTTTTTCTCAACAAGGTGATACTAAAGGAGCTGACCGAATTTCATTAGCTATGCAGTTTGCAGGGTTCCAGCAGAGTAAGGAGGCATGCACCCTACTTATTGAGGCAAATGCACACATTGGTGACCCTTATCAGGCAAAAAGCCATTTTGACTACATGATAAAACTTGGGTATAAGCCTGATGATCGCTGTGCTGCTGGCATGATTGCAGCTTATGAGAAGAAAAACTACTTGGACGATGCATTGGAGCTTCTTTTGCAGTTAGAGAACGATGGATTTGAGCCTGGGGTAGCCACTTATTCTGTTCTTGTGGACTGGTTGGGTAAGTTGCAGCTTGTTGATGAAGTTGAGCAGCTTTTAGGAAAAATAGCTTTGCTGGGTGAGGCTCCTCCTTTTAAGCTTCAAGTGAGTCTCTGTGATATGTATGCAAGGGTTGGAAATGAGAAGAAGGCCCTTCAAATTCTAGGCGTACTGGAATCTAGGAAAGATGAATTAGGAAAAGCTGATTTTGAGAGAATTATAAGTGGCCTTATTGATGGTGGGTTTCAGCAGGATGCACAACGAATATGTCGGATCATGGAGGCACAGGGTTTCGATGCATCAAAGGTTAAGATCAACCTTTTGAAGCCTGTCTCTAGAGCACCTCGTAAGAGATAG 2052 0.4761 MSWRTIASTSRHTFKRLNAIFRSHSATFPSPHHSRASFPAFLHAPFTTTTTTPHSSQPTNALIDPKLHATQNDAVVDDEDATNEFLSRFVWIMRKKVKEAYPESDKATVDGMLVAIVERVTAEMEKGRGVETASLGSGDFSEDLWGTVWEVSNMVLEDMDKERKKEKMKGFLQCEEVKEMCRFAGEVGIRGDLLRELRFKWAREKMEEHEFYEGLEKMRKESDVGEEGKKENVAVGLPKRKGKIRYKIYGLDLSDPKWAQVAERIHEAEQVFWPQEPKAITGKAKVVRSKILSSKEDDDDVLQSLLNEFVELVEPSRVEWIDLLDNLKEQNRSLYSKVAEMILAEDSFQTNVSDYYRLIDTYAKEDCFDDVERLLKKMRENGIQLDASTASVLVHMYCKGGNHDRANEAFETLKGLGFQPDFQVFNSMIMAYVNNGEPSLGEKLMREMDSGNIKPTEEIYMALLRSFSQQGDTKGADRISLAMQFAGFQQSKEACTLLIEANAHIGDPYQAKSHFDYMIKLGYKPDDRCAAGMIAAYEKKNYLDDALELLLQLENDGFEPGVATYSVLVDWLGKLQLVDEVEQLLGKIALLGEAPPFKLQVSLCDMYARVGNEKKALQILGVLESRKDELGKADFERIISGLIDGGFQQDAQRICRIMEAQGFDASKVKINLLKPVSRAPRKR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00198 683 Gene3D Tetratricopeptide repeat domain 483 682 IPR011990 GO:0005515
Viun8g00198 683 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 351 385 IPR002885 -
Viun8g00198 683 Pfam Pentatricopeptide repeat domain 373 435 IPR002885 -
Viun8g00198 683 Coils Coil 324 344 - -
Viun8g00198 683 Gene3D Tetratricopeptide repeat domain 326 482 IPR011990 GO:0005515
Viun8g00198 683 NCBIfam pentatricopeptide repeat 424 457 IPR002885 -
Viun8g00198 683 NCBIfam pentatricopeptide repeat 357 387 IPR002885 -
Viun8g00198 683 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 526 560 IPR002885 -
Viun8g00198 683 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 421 455 IPR002885 -
Viun8g00198 683 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 386 420 IPR002885 -
Viun8g00198 683 Pfam PPR repeat 533 558 IPR002885 -
Viun8g00198 683 PANTHER OS07G0661900 PROTEIN 92 669 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00198 8 1265371 1267921 Viun8g00198 8 1265371 1267921 ECH