Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00187 ATGAAGCTTGGTTTCTTTCTGTTTTCTCTGGTTCTCTACCAGATGATACTACAACCTGGGATCTTCAAAGTAGAAGGTGATGATGATGATGATGAGTTTGTGAGAGTAAGAGGGGTGCAGCTTCTGCTGAATGGGAAACCCTTCTATGCTAATGGTTATAATGCTTATTGGCTCATGTACATGGCCTCTGATCCATCTCAGAGAAACAAGGTTTCATCTGCATTTCAAGTAGCTGCAAACCATGGACTCAGCATAGCAAGAACATGGGCTTTCAGTGATGGTGGAGATAACCCCCTTCAATACTCTCCTGGATCCTACAATGAACACATGTTCCTGGGACTAGACTTTGTAATATCAGAAGCCAGAAAGTATGGGACCAAGTTGGTGTTGAGTTTGGTGAATAACTATGATGACTTTGGAGGAAAGAAACAATATGTTGAGTGGGCAAAGAGTCAGGGCCAGTCCCTACATTCTGAAGATGATTTCTTCACAAACTCTCTTGTTAAGGAATTCTACAAAAACCATATCAAGAGTGTACTCACAAGGCGTAATAACTTCACGGGAGTGGTTTACAAAGATGATCCAACCATAATGGCTTGGGAACTCATGAATGAAATTAGATGCCCTTCTGATCATTCAGGAAACACAGTTCAGGCTTGGATTACTGAAATGGCAACTTACTTGAAATCCATAGATGGAAATCATTTACTTGAAGCTGGTCTGGAGGGCTTCTATGGACTTTCAAAGAATGAGTCTAATCCAAATTTCCAAGTTGGAACAGATTTCATTGCAAACAACCAAATCCCTGCCATTGATTTTGCCACAGTTCATTCATACCCTGATCAATGGTTACCAGGATCAAGCAATGAAGAACAAACCTTATTTTTGGTTCGATGGCTGAATGATCACATACAAGATGCACAGATTATTATTCAGAAGCCAGTTTTGTTTGGTGAGTTTGGAGTATCAGTGAAAAACATGAGCAGTGACTCAATTACACTAAGGGATCAATTTTTCAACTTGGTCTATTCTTCAATCTATTCATCAGCAAGTGATGGTGGTGCAGCAACTGGTGGCTTGTTTTGGCATCTTTTAGCAGAAGGAATGGATTCTTTTAAAGATGGCTATGAAGTGCCCTTAGATGAGAATAGTTCAACTGCTACTTTGATTGCTCAAGAGTCTCAGAAGCTCAACAGAATCAGGATGAAGAAATCCTCCATTGTTAAGAAGAATAAAGCAAGGGATGTTAGAAACTGA 1257 0.4002 MKLGFFLFSLVLYQMILQPGIFKVEGDDDDDEFVRVRGVQLLLNGKPFYANGYNAYWLMYMASDPSQRNKVSSAFQVAANHGLSIARTWAFSDGGDNPLQYSPGSYNEHMFLGLDFVISEARKYGTKLVLSLVNNYDDFGGKKQYVEWAKSQGQSLHSEDDFFTNSLVKEFYKNHIKSVLTRRNNFTGVVYKDDPTIMAWELMNEIRCPSDHSGNTVQAWITEMATYLKSIDGNHLLEAGLEGFYGLSKNESNPNFQVGTDFIANNQIPAIDFATVHSYPDQWLPGSSNEEQTLFLVRWLNDHIQDAQIIIQKPVLFGEFGVSVKNMSSDSITLRDQFFNLVYSSIYSSASDGGAATGGLFWHLLAEGMDSFKDGYEVPLDENSSTATLIAQESQKLNRIRMKKSSIVKKNKARDVRN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00187 418 Pfam Cellulase (glycosyl hydrolase family 5) 46 329 IPR001547 GO:0004553|GO:0071704
Viun8g00187 418 Gene3D Glycosidases 29 401 - -
Viun8g00187 418 SUPERFAMILY (Trans)glycosidases 33 389 IPR017853 -
Viun8g00187 418 PANTHER - 8 407 IPR045053 GO:0004553
Viun8g00187 418 FunFam Mannan endo-1,4-beta-mannosidase 6 30 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00187 Viun-Chr8 1163067 1166867 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00187 8 1163067 1166867 Viun8g00187 8 1163067 1166867 ECH
Viun8g00187 8 1163067 1166867 Viun9g03600 9 41534025 41536977 PCT