Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00186 ATGAATGCAACCATTGCAACTCCCGATGCAAGCCGTAATATTGTAGCTAACAAGGGGTTTGGGATAAGAAGAAGAAGTTCTGGCTTCTGGGGTGAGAACACAAGGGGAAGTCTTAACGTAAGATTTCCCAGTACTCAACCATGCAAGAGTTTTAAGGCTTCGAGTCTCAAGCCTGCCACTGCACGCGCTGTTTACTCTTCAGACGTCAACGTCAACGTAGAGTCTCCGGCAACGGAGGGATCAGTTTTTCAGAGTCCAAAGGCAAACCCTGAAAATGTAGCTGCCATCATACTGGGTGGAGGTGCTGGAACTCGACTCTTTCCTCTTACCAGCACAAGAGCCAAGGCCGCTGTTTCCATTGGAGGGTGTTACAGACTCATAGATATTCCTATGAGCAATTGCATCAACAGTGGCATCAGGAAAGTGTACGTTTTAACTCAGTTCAACTCTTTCTCCCTCAATGCGCACCTGTCTCGCACGTATAATATTAAAAATGGAGTGAACTTTGGAGGTGGTTTTGTGGAGGTCTTGGCTGCTACTCAAACTCCTGGAGAATCTGGGAGCAAATGGTTCCAAGGAACAGCTGATGCAGTGAGGCGATTTATCTGGGTTTTTGAGGATGCCAAGAACAAGAATATTGAACACATAATGATAATTTCTGGTGACCATCTTTGCCGGATGGACTATTTGAAGCTTGTGGAGCAACACAGTGCGAACAATGCTGATATCACAGTTTCATGTGTACCTATGGATGAAAGCGGTGCATATGATCATGGGCTAATGAAAATTGATAAAAGGGGAAGGGTTACAGAGTTTTTAGAAAATCCAAATGAAGCTGATGTGAACGCAATGCGTGTTGATACCACTCTCCTAGGGTTAAGTGCAGAAGAAGCAGAGAAATATCCTTTCATTTCTCCAATGGGAGTTTTTGTGTTCAGAACTGAGGTGCTGCTGAAACTGCTAAGATGGAGTTGTCCTTCTTGTAATGACTTAGAATCTGAAATTATCCCATCTTCTTTGAGGGACCACAAAGTCCAAGCATATATGTTCAAGAATTACTGGAAAGATATTGGAACTATCAAGTCCTTCTTTGAAGCCAATCTGGACCTAACAGAACAGTCTCCAAAGTTTGAGTTCTATGATCAGAAGAGGCCTTTCTTCACTTCCCCAAGAAACCTACCACCCACTAGAGCAATAAAATGCAGGATTGTGGACGCAATTATCTCTCATGGGGTCTTCTTGAATCAGTGTAAAGTTCAACATTCTGTTGTTGGTTTGCGCTCACGTTTAGAGGCTGGTTCAGAGCTTCAGGATACCATGATGATGGGTGCTGACTTCTATCAAACTGATTCTGAAATTGCAACACTGCTGGCAGCTGGAAAGGTTCCAATGGGTGTTGGAGAGAATACCAAAATCAGGAAGTGCATCATTGACAAGAATGCCAAAATAGGAAGAAATGTGATCATTGCCAATGCTGATGGTGTTGAAGAAGCTGACAGGCCTGAAGAGGGATTCTACATTAGGTCTGGCATCGTAGTTATAGTGAAGAATGCAACAATCAAAGATGGAACAGTGATTTGA 1581 0.4339 MNATIATPDASRNIVANKGFGIRRRSSGFWGENTRGSLNVRFPSTQPCKSFKASSLKPATARAVYSSDVNVNVESPATEGSVFQSPKANPENVAAIILGGGAGTRLFPLTSTRAKAAVSIGGCYRLIDIPMSNCINSGIRKVYVLTQFNSFSLNAHLSRTYNIKNGVNFGGGFVEVLAATQTPGESGSKWFQGTADAVRRFIWVFEDAKNKNIEHIMIISGDHLCRMDYLKLVEQHSANNADITVSCVPMDESGAYDHGLMKIDKRGRVTEFLENPNEADVNAMRVDTTLLGLSAEEAEKYPFISPMGVFVFRTEVLLKLLRWSCPSCNDLESEIIPSSLRDHKVQAYMFKNYWKDIGTIKSFFEANLDLTEQSPKFEFYDQKRPFFTSPRNLPPTRAIKCRIVDAIISHGVFLNQCKVQHSVVGLRSRLEAGSELQDTMMMGADFYQTDSEIATLLAAGKVPMGVGENTKIRKCIIDKNAKIGRNVIIANADGVEEADRPEEGFYIRSGIVVIVKNATIKDGTVI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00186 526 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 78 391 IPR029044 -
Viun8g00186 526 CDD LbH_G1P_AT_C 394 520 - -
Viun8g00186 526 SUPERFAMILY Nucleotide-diphospho-sugar transferases 92 487 IPR029044 -
Viun8g00186 526 FunFam Glucose-1-phosphate adenylyltransferase 392 526 - -
Viun8g00186 526 Pfam Nucleotidyl transferase 95 372 IPR005835 GO:0009058
Viun8g00186 526 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 190 198 IPR005836 GO:0005978|GO:0008878
Viun8g00186 526 Gene3D Hexapeptide repeat proteins 392 526 - -
Viun8g00186 526 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 49 526 IPR011831 GO:0005978|GO:0008878
Viun8g00186 526 SUPERFAMILY Trimeric LpxA-like enzymes 389 526 IPR011004 -
Viun8g00186 526 CDD ADP_Glucose_PP 95 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00186 Viun-Chr8 1159706 1162956 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00186 8 1159706 1162956 Viun9g03601 9 41536905 41540729 PCT