Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00178 ATGGGATCAGCTTGTTGTGTTGCTGCAAAGGATCCTAATCTTCCTAACAGAACTAGAGGTGAAAGCTTGCGTAGGGATGTTGTGTATTCACCATCGTGGAGCTTTCAATGGGATAGTAGGGAACGTGTTACTGGTGAAATTGAGAATCCTTCTTATCACACATCTCATTTAGACAGTAGAAATGTCAGCATGGAGTTAAAAGGTTCATTAAGCTCTGAAAGAGGTAATCTGTCTGATGGGGGAAGCATCATGGAGAACTCTGTGACTCCTATTTCACTGAAGTCCCCTGTTGATGAGGCGCTGGTTGCAAATCTGATGACCCCCTCGTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAATCCAGCGGAGTCTTCAATACCAAATCTTTCTTTTTCAATACCTTCAGTCTTCTCAACGCCCACAGTAGATCCTATGCCTAATCACAATTATAACCATCTTCCCAACTCTACCCCAACAAGATGGGCACATCGATCACCAGCACACCCTCTGTTGAGACAGATTTCTGATAGTCGAATTATGGGTCTGAAATCACCGGACAACTCAATTTCTGAAGGAAGGCCATCCTTTGTACTCTCTACTTGCAGCAACGAAATGGCTGCTGGATCCCTATGTGGATCATCTGATGGATGGTCAATGCGAACCTTCTCTGAGATGGTGGCATCATCCCAAAGGGAAAGGTGGTCTTTTGATAGTGAGTGTTTTGGCTCTGGTCGTCACAAGATAAGTGGATCCAGTAGCAGGTTCTCATATTCTCCCTCCATGGAACTGCAATCTTGTGGGGCTTGCTCAAAGCTTTTGACTGAGAGATCAACATGGAGCAACCAAAAGTTTATTGCCAGCAATGACCTCTCGGTTGTTGCTGTGCTGGTCTGTGGTCATGCATATCATGCAGAATGTTTAGAGGCCATGACACCAGAGGCAGATAGGTATGATCCAGCTTGTCCAATTTGTATGGTTGGAGAGAAGCACTTTTCAAAGTTGTCTAGAAAAGTTCTTCGGGCTGAATCAGAGATGAAGGCCAAGAACCACAAGATATCAAGAAACCGTGTGGTTGATAGCTACCTTGATGGTGGTTTTGATGTTTTTGATCGCCAAAAAGATATTGATTTAGGAGGAAAAGTTTCAAAAATGGAGCCAAGCTCCAGTGCGAGGAGCTCATTTGGAAAGCCATTCTTGAGGCGGCACTTTTCACTTGGATCCAAGTGGAGCCGATCCCTGTCCGATAACGATTCTGCCAGGAAGAAAGGCTTTTGGGCTAGATATCGGAAAGATTGA 1308 0.4465 MGSACCVAAKDPNLPNRTRGESLRRDVVYSPSWSFQWDSRERVTGEIENPSYHTSHLDSRNVSMELKGSLSSERGNLSDGGSIMENSVTPISLKSPVDEALVANLMTPSSDLSMSSNFSTVVKNPAESSIPNLSFSIPSVFSTPTVDPMPNHNYNHLPNSTPTRWAHRSPAHPLLRQISDSRIMGLKSPDNSISEGRPSFVLSTCSNEMAAGSLCGSSDGWSMRTFSEMVASSQRERWSFDSECFGSGRHKISGSSSRFSYSPSMELQSCGACSKLLTERSTWSNQKFIASNDLSVVAVLVCGHAYHAECLEAMTPEADRYDPACPICMVGEKHFSKLSRKVLRAESEMKAKNHKISRNRVVDSYLDGGFDVFDRQKDIDLGGKVSKMEPSSSARSSFGKPFLRRHFSLGSKWSRSLSDNDSARKKGFWARYRKD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00178 435 SUPERFAMILY RING/U-box 269 329 - -
Viun8g00178 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 330 IPR013083 -
Viun8g00178 435 PANTHER EXPRESSED PROTEIN 1 333 - -
Viun8g00178 435 ProSiteProfiles Zinc finger RING-type profile. 270 328 IPR001841 -
Viun8g00178 435 SMART ring_2 270 328 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00178 Viun-Chr8 1091160 1095115 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00178 8 1091160 1095115 Viun8g00178 8 1091160 1095115 ECH