Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00157 ATGGCTGAAGAGGGAACAGTTATTGCCGTTCACACCGTTGAGTCGTGGAAAGAAGAATTCCAGAAGGGAAAGGACTCCAAAAAGCTGGTTGTGGTGGATTTTACTGCTTCCTGGTGTGGTCCATGCCGTTTTATTGCCCCAATTCTTGCAGAGATTGCTAAGAAGATGCCTGAAGTAACCTTCCTCAAGGTGGATGTGGATGAACTGAAGAGTGTTGCTGAGGAATGGTCCATTGAGGCTATGCCAACCTTCTTGTTCTTCAAAGAGGGTGAGCAGGTGGACAAGGTTTTGGGTGCTAAGAAGGATCCCCTGGTAGCGACCATAACCAAGCATGCTACTGCTGTTGCTTGA 351 0.4786 MAEEGTVIAVHTVESWKEEFQKGKDSKKLVVVDFTASWCGPCRFIAPILAEIAKKMPEVTFLKVDVDELKSVAEEWSIEAMPTFLFFKEGEQVDKVLGAKKDPLVATITKHATAVA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00157 116 FunFam Thioredoxin 6 113 - -
Viun8g00157 116 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Viun8g00157 116 PIRSF Thioredoxin 7 113 IPR005746 GO:0015035
Viun8g00157 116 PANTHER THIOREDOXIN 7 110 - -
Viun8g00157 116 CDD TRX_family 18 99 - -
Viun8g00157 116 PRINTS Thioredoxin family signature 38 47 - -
Viun8g00157 116 PRINTS Thioredoxin family signature 77 88 - -
Viun8g00157 116 PRINTS Thioredoxin family signature 30 38 - -
Viun8g00157 116 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Viun8g00157 116 Gene3D Glutaredoxin 1 115 - -
Viun8g00157 116 SUPERFAMILY Thioredoxin-like 4 112 IPR036249 -
Viun8g00157 116 Pfam Thioredoxin 8 109 IPR013766 -
Viun8g00157 116 NCBIfam thioredoxin 21 110 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00157 Viun-Chr8 1004752 1006000 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00157 8 1004752 1006000 Viun8g00157 8 1004752 1006000 ECH
Viun8g00157 8 1004752 1006000 Viun9g03618 9 41654324 41655663 PCT