Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00148 ATGCTGAAATCAGGCATGAGAATGAGTGGTAGTAAGCAGGTGAAAAAAGGTGCAAAAGCGAGTTCCAGAAAGGGGTGTATGAGAGGCAAAGGAGGCCCTGAGAATGCGAGTTGCACCTTCAAAGGTGTGAGGCAGAGAACTTGGGGCAAATGGGTGGCTGAGATCCGTGAGCCTAACCGTGGTGCACGCCTCTGGCTAGGCACATTTGAGACCTCTGTAGAGGCTGCCATGGCTTATGATTGTGCAGCACGTAAGCTCTACGGACCTGATGCAATACTCAACCTCCCACACCTTCCTATCATGCCCTTCAATTTCCAGTTTCCACCACCATACCCTCAGATTCCCCCTCCCTGTGATGTTTTCAATCTCCCCTCCTTTGATTTCACCAACAACCTCACCGATCACACCAACATCATCTTCAACCCTGTGCTCTCCATGCCTCCTCAGCCTCCTCAGCCTCCTCAGCATGCAATTGCTGATTCTGCACCTGTGTACACCAGCGATTCTCATGTTGCAATTCCCCATGAAACCACCACCACCACCATGTCCATGGAGATGAACGGGGACAGGGTTGATTCTTTTGGGGGGTCATTCGATGACATTCCTGAGCCTATGTTCGATGATTCCATCTGGGCTGAAGCTGCTATGTCTCTCGATTTGCCTCTGATACCAGATGGTGCAGGGATTTATGAAGCTAAAACCTTTCTTGAAGTGGGTCCTTGGGACTCTCTGCAAACTCCCTGGTGCATGTAA 753 0.5046 MLKSGMRMSGSKQVKKGAKASSRKGCMRGKGGPENASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFETSVEAAMAYDCAARKLYGPDAILNLPHLPIMPFNFQFPPPYPQIPPPCDVFNLPSFDFTNNLTDHTNIIFNPVLSMPPQPPQPPQHAIADSAPVYTSDSHVAIPHETTTTTMSMEMNGDRVDSFGGSFDDIPEPMFDDSIWAEAAMSLDLPLIPDGAGIYEAKTFLEVGPWDSLQTPWCM 250
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00148 250 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Viun8g00148 250 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Viun8g00148 250 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 13 169 - -
Viun8g00148 250 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Viun8g00148 250 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Viun8g00148 250 MobiDBLite consensus disorder prediction 1 33 - -
Viun8g00148 250 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Viun8g00148 250 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Viun8g00148 250 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Viun8g00148 250 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Viun8g00148 250 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun8g00148 Viun-Chr8 983137 984280 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Viun8g00148 AP2 1e-13 CL0081
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00148 8 983137 984280 Viun8g00148 8 983137 984280 ECH