Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun8g00148 | ATGCTGAAATCAGGCATGAGAATGAGTGGTAGTAAGCAGGTGAAAAAAGGTGCAAAAGCGAGTTCCAGAAAGGGGTGTATGAGAGGCAAAGGAGGCCCTGAGAATGCGAGTTGCACCTTCAAAGGTGTGAGGCAGAGAACTTGGGGCAAATGGGTGGCTGAGATCCGTGAGCCTAACCGTGGTGCACGCCTCTGGCTAGGCACATTTGAGACCTCTGTAGAGGCTGCCATGGCTTATGATTGTGCAGCACGTAAGCTCTACGGACCTGATGCAATACTCAACCTCCCACACCTTCCTATCATGCCCTTCAATTTCCAGTTTCCACCACCATACCCTCAGATTCCCCCTCCCTGTGATGTTTTCAATCTCCCCTCCTTTGATTTCACCAACAACCTCACCGATCACACCAACATCATCTTCAACCCTGTGCTCTCCATGCCTCCTCAGCCTCCTCAGCCTCCTCAGCATGCAATTGCTGATTCTGCACCTGTGTACACCAGCGATTCTCATGTTGCAATTCCCCATGAAACCACCACCACCACCATGTCCATGGAGATGAACGGGGACAGGGTTGATTCTTTTGGGGGGTCATTCGATGACATTCCTGAGCCTATGTTCGATGATTCCATCTGGGCTGAAGCTGCTATGTCTCTCGATTTGCCTCTGATACCAGATGGTGCAGGGATTTATGAAGCTAAAACCTTTCTTGAAGTGGGTCCTTGGGACTCTCTGCAAACTCCCTGGTGCATGTAA | 753 | 0.5046 | MLKSGMRMSGSKQVKKGAKASSRKGCMRGKGGPENASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFETSVEAAMAYDCAARKLYGPDAILNLPHLPIMPFNFQFPPPYPQIPPPCDVFNLPSFDFTNNLTDHTNIIFNPVLSMPPQPPQPPQHAIADSAPVYTSDSHVAIPHETTTTTMSMEMNGDRVDSFGGSFDDIPEPMFDDSIWAEAAMSLDLPLIPDGAGIYEAKTFLEVGPWDSLQTPWCM | 250 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun8g00148 | 250 | PRINTS | Ethylene responsive element binding protein signature | 40 | 51 | IPR001471 | GO:0003700|GO:0006355 | |
Viun8g00148 | 250 | PRINTS | Ethylene responsive element binding protein signature | 62 | 78 | IPR001471 | GO:0003700|GO:0006355 | |
Viun8g00148 | 250 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 13 | 169 | - | - | |
Viun8g00148 | 250 | ProSiteProfiles | AP2/ERF domain profile. | 39 | 96 | IPR001471 | GO:0003700|GO:0006355 | |
Viun8g00148 | 250 | SMART | rav1_2 | 39 | 102 | IPR001471 | GO:0003700|GO:0006355 | |
Viun8g00148 | 250 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Viun8g00148 | 250 | FunFam | Ethylene-responsive transcription factor 2 | 38 | 97 | - | - | |
Viun8g00148 | 250 | Gene3D | AP2/ERF domain | 39 | 97 | IPR036955 | GO:0003700|GO:0006355 | |
Viun8g00148 | 250 | SUPERFAMILY | DNA-binding domain | 39 | 97 | IPR016177 | GO:0003677 | |
Viun8g00148 | 250 | CDD | AP2 | 38 | 98 | IPR001471 | GO:0003700|GO:0006355 | |
Viun8g00148 | 250 | Pfam | AP2 domain | 39 | 88 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun8g00148 | Viun-Chr8 | 983137 | 984280 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Viun8g00148 | AP2 | 1e-13 | CL0081 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun8g00148 | 8 | 983137 | 984280 | Viun8g00148 | 8 | 983137 | 984280 | ECH |