Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00140 ATGAACGCAATTCGTTCTCGTTGGTTTATGAGAATGGCAGAAGACCTTGGAAAGAGCAACCTCGAATCCTCTGCTGCTGCTGCTGCTGCTGCTGCTTCTGCTTCCACGACAACCTCGCGACGCTTTTGGCCTTCCGTCTTACGTTGGATACCCACTTCCACCGACCACATCATCAATTCCGAAAAGCGGCTTCTCTCACTTGTCAAGACTCCGTATGTTCAAGAACAGATTAATATTGGTTCTGGTCCACCTGATTCCAGAGTTAGATGGTTCCGTTCATCGAGCAATGAACCACGGTTTATTAACACTGTCACATTTGACAGTAAGGATGATTCTCCTACGTTGGTAATGGTTCATGGATATGCGGCGTCACAGGGTTTCTTTTTTCGTAATTTTGATGCACTTGCCACTCGTTTCAGAGTTATTGCTATCGATCAGCTTGGTTGGGGTGGATCTAGCAGGCCTGACTTTTCATGCAGAAGTACTGAAGAAACTGAGGCGTGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAACCTGAGCAATTTTATACTACTAGGGCATTCTTTTGGTGGTTATGTTGCTTCCAAATACGCACTTAAGCACCCCGAACATGTAAAACACTTGATTCTGGTGGGACCTGCTGGATTTTCGTTTGAATCAGAGAGAATTACAAAGTTCTTAACTACCTGGAAGGGATCAATCCTGAATCAAATATGGGAATCTAATTTTACGCCTCAGAAAATCATCAGGGGTTTAGGTCCTTGGGGTCCTGATATGGTCCGCAAGTATACCAGTGCCAGGTTTGTTACACATACAACTGGAGAAATGCTGACAGAATCTGAATCAGGATTACTGACAGATTATGTTTACCATACTTTAGCAGCAAAAGCTAGTGGCGAGCTGTGCTTAAAATATCTATTTTCATTTGGAGCACTGCCGAGGTCGCCTCTTCTTGACAGGGCATCAGAGTGGAAGGTTCCCACAACTTTCATATATGGTTTTCAGGACTGGATGAATTATGAAGGAGCTCAAGAAGCTCGCAAAAATATGAAGGTTCCCTGTGAAATACTTAGGGTTCCTCAGGCCGGGCACTTTGTGTTCATTGACAACCCAAGTGGCTTTCATTCAGCTGTGTTTTACGCTTGCCGCAGGTTTCTAAGTTCTGATCCAGACCATGAATCCCTTCCTGAATGGATAATCTCAGCATAG 1218 0.4417 MNAIRSRWFMRMAEDLGKSNLESSAAAAAAAASASTTTSRRFWPSVLRWIPTSTDHIINSEKRLLSLVKTPYVQEQINIGSGPPDSRVRWFRSSSNEPRFINTVTFDSKDDSPTLVMVHGYAASQGFFFRNFDALATRFRVIAIDQLGWGGSSRPDFSCRSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVASKYALKHPEHVKHLILVGPAGFSFESERITKFLTTWKGSILNQIWESNFTPQKIIRGLGPWGPDMVRKYTSARFVTHTTGEMLTESESGLLTDYVYHTLAAKASGELCLKYLFSFGALPRSPLLDRASEWKVPTTFIYGFQDWMNYEGAQEARKNMKVPCEILRVPQAGHFVFIDNPSGFHSAVFYACRRFLSSDPDHESLPEWIISA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00140 405 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 99 385 - -
Viun8g00140 405 Pfam alpha/beta hydrolase fold 113 374 IPR000073 -
Viun8g00140 405 Gene3D alpha/beta hydrolase 99 387 IPR029058 -
Viun8g00140 405 PRINTS Alpha/beta hydrolase fold signature 201 214 IPR000073 -
Viun8g00140 405 PRINTS Alpha/beta hydrolase fold signature 187 200 IPR000073 -
Viun8g00140 405 PRINTS Alpha/beta hydrolase fold signature 138 153 IPR000073 -
Viun8g00140 405 PANTHER RE40534P-RELATED 39 382 - -
Viun8g00140 405 PRINTS Epoxide hydrolase signature 201 214 IPR000639 GO:0003824
Viun8g00140 405 PRINTS Epoxide hydrolase signature 138 153 IPR000639 GO:0003824
Viun8g00140 405 PRINTS Epoxide hydrolase signature 187 200 IPR000639 GO:0003824
Viun8g00140 405 PRINTS Epoxide hydrolase signature 362 384 IPR000639 GO:0003824
Viun8g00140 405 PRINTS Epoxide hydrolase signature 329 345 IPR000639 GO:0003824
Viun8g00140 405 SUPERFAMILY alpha/beta-Hydrolases 102 381 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00140 Viun-Chr8 896174 900103 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00140 8 896174 900103 Viun8g00140 8 896174 900103 ECH
Viun8g00140 8 896174 900103 Viun9g03641 9 41830665 41836502 PCT