Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00138 ATGGAGGGAGAGGATATTAGGTCTGGGACCAGGAAGAAGCGATCCAAGAAGGAAATTGGTTTTGACTCTGACGACGACGAGCCCATTGGCTCAATCTTTAAGCTGAAGAGGTCCAAGAGGAAGGGTAGTGGTAGTGGTGAGGCTGTTAGGGAGAAGGAGGATTTGGGGGGTATGGATGATAATGATACCTTGGCTAGCTTTAGGAAGAGATTGAAGGGTCCTAAAAGAGATCAGGGATCTGGGGTTGGAAGAGGAGCAAGTCCTGCTTTGCATGTGTCTGATGAAGAATTGGTTGGATTGGGAGCTAAGGGTAAGGATGAGAAAGGGGTGGCCTTGGTGCCTGGTGGTGAGGACATACAGATGCAGGATTCTTCTGATCAACACATGGAAGATTCGTTGTCTACGATTTTTCACAAGGCACAGTCTAGCTCTGCTAGGAAATCTCGTGGGGTTTCGAGGCAGAAAAAGGGGATTCAGAAGGTGGATAGTGGGTTGAGCTCTGGAGGTTTTGTGGAAGCTGTGGATGGTGTGGTTGAAAGTAGATCCGGATCTGCTTCTGGCTCGAAATTGGTTGGGGGGAATGCCATGTCTGATGATGCTTTGCCTCAAACGTCTGAACCGGTTGTCACATCCGTGGTGGACGACCAGAAGTGTGTTAACGACTGTTTTCAAGAGGGAATTGCTAAGGGTGAATGTGATTTGGACATTCCAGGTGGATCGAATCAGTCAAATGATGTCTACCGTGAAGATGGGAAGCAGTTTTCTTGTGCTGTACAATCTGAAGATATTTCTTGTGATTCTGAGAAGAAGGTTGCACTGCAGGAAAGTGTTGTTACCAGTGGTGATTTACATAACTTATCTTCTATGTTAAACAATGAAATAGTTGATACTGCATCTCTCTCAAAACTGGGGGAAGGGGAAAGACAATTTACTGAGGTCCGGGAGCTTGAGAATAGATTGACTGATGACCTAGTACAGGCAAGCAACACTGCTTCAGAACGTGATATTTCTACTTCTGCAGGGAAAGAAAATGTCTTGAAATCTTCGCACACTGAACCCTTGATTAAATCAACTGAAAATGCATTGAATGAGAATAATGATATGGTTTCTGGAAAAGATTTTCAGGAATCCTCAAGTAATGGAGTTCTAAAGTTATATGGAGGCCATATGGAAGCAGATGGAGCTGGAAAATCAGAAACTGAGTTTGTTTCTGATAGAAATTTCTGTGGTTATAGTAATTTAGATACAAAGGCTGAAGTGCATGATTTTGTTCAAGGTTTTTCACCTAAAAGAAATGATGTAACTGTCAGTGGTTCTTCTATGGTGTCTAACGAAGCTGAGTTGGCTGCCCAATCAAATTACCCAGAGAAACCTGTAGAAGCTTGCAACATTCCAAAAGACCCCACTGCTTCTATTCTGAAATGTAGCTCAGTTTTAGATCCAAATCAATCAGATGGATCCTCTCTTCAATCTTCAATTCCAGATGAAAATGGGATCTCTGCAGAATACCATGCCTCTGTGACTGATTTTGTCGATAATGATGGTAAGATTTCAAGCATTCCGCGGTTGGTGAGAAAGACCAAAATGCGCAAGCATGGAGACATGACATATGAGGGGGATGCTGATTGGGAAGTTTTAATTAATGATCAAGCTCTAAATGAAAGTCAAGTTATGACAGATGTTGAACGCACTCTTAAAACAAGAATGAAGCATGATTCCTCTTTGAATACTGGTGAAGACTCTGAAAATGTTGCAGTAGTGGCAGTATCAGCTGGGCTGAAAGCCCGTAAAGCTGGTCCAATCGAGAAAATAAAGTTTAAAGAGATCTTGAAGCGAAAAGGTGGTCTCAAGGAATATTTGGATTGCAGAAATCAAATTTTAAGTCTGTGGAGCCGAGATGTCACACGTATTTTGCCACTTGCTGAATGTGGAGTTAATGATACCGATTCTGAGGATGGAAGTCCTCGTTCTTCTCTTATTAGGGAGGTCTATGCATTTCTCGATCAGTATGGTTATATAAATGTTGGAATTGCCTCCCAGAAGGAGAATGTTGGAAGTAGTGGAAGGCACTGTTATAAACTGGTAAAAGAAAAAGGTTTTGAGGAAAGTCTCGCAGCTTCAATGGTTGACTCTGAAGATGGAGTTTCCTTTCTTGTTGGCCAGACTAAAATGTCAGATGCTTCCAATGAGATTAACAATGGTCTAAGAAAGGATTGCAATGACCTAACAATTGAAGCTACAGAAGGTATGGGCCACAGTAATGAAGTGAAGGTGGATTTATCAAACATATCACAACAGGAAGAAGGAAAAGTTTTTGATTACCAGGAAAATGATGGATTTCAGGATGGAACTATTGGCAGTTCCGTTCCTTCTTCCAACTTTGCTGATTGCAAATTAACTTCTCTGATAGCTAAAGAAAAAAGCAATGACTCTACCTGCATTAAATCTGTCTGGGATGGTCAGGTAGGTGACAATCTGCAGCCTGATTTAGATCCGAGAAAGAGAGTAATTGTGATTGGAGCTGGGCCTGCTGGGTTAACTGCTGCTCGCCACTTGCAACGTCAAGGATTTCCTGTAACTGTGCTTGAGGCTAGGAGTAGGATAGGAGGTCGTGTGTTTACTGATCACTCCTCACTTTCTGTCCCTGTCGATCTTGGAGCTAGCATTATAACTGGTGTTGAGGCTGATGTGGCAACTGAGCGAAGACCAGATCCTTCCTCGTTGATTTGTGCTCAGTTGGGCCTTGAGTTGACGGTATTGAACAGTGATTGCCCTCTTTATGACATAGTGACAGAACAAAAAGTTCCTGCAGATATGGATGAAGCACTTGAAGCTGAATATAATACCCTTATAGATGACATGGTATTGGTTGTTGCTCAGAAAGGTGAACAAGCAATGAAAATGTCTCTTGAAGATGGTTTAGAATATGCCCTCAAGATTCGGCGAATGGCACGCACCGAAAGCAGTGAAGAAACTGAACAAATTTCTGCAGATAGACCATTTGATTCCAAAAGGGACAGTTCTGTGGAAAAAAAGCTTGATGAGGAGATTTTGAGCCCTCAGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTTCACTTAATGATGTTTCTCTTCCCTACTGGAATCAAGATGATGTGTATGGAGGTTTTGGCGGAGCTCATTGTATGATTAAAGGGGGTTACAGTTCCGTTGTTGAGTCTCTGGGAGAAGGAATTAGAATTCACTTGAACCACGTTGTAACAAATGTGTCGTATGGTATCAAGGAACCAGGTCAAAGTTATAAAGTCAAAGTTTCTACATCAAATGGCAATGAGTTCTTTGGTGATGCTGTCCTTGTTACTGTTCCACTTGGCTGTTTAAAGGCTGAAACTATACAATTCTCCCCTCCTTTGCCACAGTGGAAATGTTCTTCTGTTCAGCGTCTTGGCTATGGAGTTCTAAATAAAGTGGCTTTGGAATTTCCTAGTGTATTTTGGGATGATGCCGTGGACTACTTTGGAGCGACAGCTGAGGAGAGAAACAGTAGAGGTCACTGCTTCATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTCCTTATTGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTGTAAGCTTGAGCTCTTCCGATCATGTTAAACATGCATTGAAGGTTCTCCGAAAACTTTTTGGACAGGATTCAGTTCCAGATCCTGTTGCCTATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCTTATGTTGCAGTTGGAGCCTCAGGAGAAGACTATGATATATTAGGGAGACCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCAGATACTGTTGGTGGTGCAATGATGAGTGGACTACGAGAGTCTGTTCGCATAATTGACATATTGAGCACTGGAAATGATTATATTGCTGAGGTGGAGGCATTGGAAGCTTCACGGGGACAGTTAGACACTGAAAGGGATGAAGTGAGGGATATCATAAAGAGACTTGATGCAGTAGAACTTTCTAACATAATGTACAAGAACTCTTTAGATGGTGCTCAAATTTTAACCCGGGAAGCTTTGTTAAGGGAAATGTTCTTTAATACGAAAACCACTGCTGGACGCTTGCACGTGGCTAAACAATTGTTAACTCTTCCTGTTGGAAACTTGAAGTCTTTTGCTGGAAGTAAAGAGGGGCTAGCCATTCTCAATTCATGGATACTGGACTCAATGGGAAAGGATGGGACCCAACTCTTGAGGCACTGTTTGCGACTTCTTGTCCGTGTTTCAACTGATCTTCTTGCTGTACGATTATCAGGAATGGGAAAAACAGTGAAGGAAAAAGTTTGTGTACATACCAGCCGCGATATTCGTGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTTTTTCGCAAGGAAAAAGCTTCTAATGGGGGATTAAAGTTAACAAGACAAACAACTGCAGTAGATTTATCTAAGAGAAAATCTGTTAAAGATTCTGCCTCGGGAAAACCACCTCTGGGCACATATCATGGTACCAATGAGAATAAAGGAGGCTTGCTGAATCCTACCTCTGCTGGAAGCAATTCACCTTCCCATGCCCATGTGAAGAAGTTGCACTGCAAACAAGGAAGACAGCTTCCAGCATATGACTCAAGGCATGAAGTCAGTTCTTCCAGGTCTAAAGGTTCAATAGACAGAGTGGTTACAGAGGAGGATAACCACTGTGCTATATCTGAAGAAGAACAGGCTGCTATAGCTGCTGCAGAGGCTGCACGTGCTAAAGCTCTTGCTGCTGCTGAGGCATATGCTTCTGCAGAAGCCAGATCCAATTCGCTGTTACAGCTTCCTAAGATACCCTCATTCCATAAATTTGCTAGACGTGAGCAGTCTTCACAAAATGACGAGTGTGATAGTAGAAAAAGATGGTCAGGTGGTGTTTTTGGAAGGCAAGACTGTATTTCAGAGATTGATTCTAGGAATTGCAGAGTTAGGGATTGGTCTGTTGATTTCTCTGCTGCTTGTGTCAATCTTGATAATTCCAGAATGCCAGTTGATAACCTCTCACAGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGGGAGCACTCAGGAGAAAGTGCTGCTGGGGACAGCACCATATATACGAAAGCTTGGATTGACACAGCTGGTGGTGTTGCAATTAAAGATCATCATGCCATTGAGAGATGGCAATCTCAAGCAGCTGCTGCAGATTCTTATTTTTCTAATCCAACTATTCATTTGAAGGACGAGGAGGACTCAAATGCCTGTTCTAAGCTACCAAGCTGGAAGCGTGATGGTGTCGCTAATGAGAGCTCTATTTCACAGGTTACTGTAAATAAGGAGGCCCTGAAGAGTCATTCCCGAGCAGCAGATCATATTAAACAGGCTGTTGTGGACTATGTTGCATCACTGCTTATGCCCCTTTATAAGGCAAGAAAACTAGACAAGGATGGATACAAGGCTATAATGAAGAAAAGTGCAACAAAGTTTCAGGTCATGGAGCAAGCCACAGACGCAGAAAAAGCCATGACTGTACGTGAGTTTCTAGATTTTAGGAGGAAGAATAAGATTCGCTCCTTTGTGGATATACTGATTGAGAGGCACATGACTATGAAATCAGATGTGAAATCTTAA 5715 0.4269 MEGEDIRSGTRKKRSKKEIGFDSDDDEPIGSIFKLKRSKRKGSGSGEAVREKEDLGGMDDNDTLASFRKRLKGPKRDQGSGVGRGASPALHVSDEELVGLGAKGKDEKGVALVPGGEDIQMQDSSDQHMEDSLSTIFHKAQSSSARKSRGVSRQKKGIQKVDSGLSSGGFVEAVDGVVESRSGSASGSKLVGGNAMSDDALPQTSEPVVTSVVDDQKCVNDCFQEGIAKGECDLDIPGGSNQSNDVYREDGKQFSCAVQSEDISCDSEKKVALQESVVTSGDLHNLSSMLNNEIVDTASLSKLGEGERQFTEVRELENRLTDDLVQASNTASERDISTSAGKENVLKSSHTEPLIKSTENALNENNDMVSGKDFQESSSNGVLKLYGGHMEADGAGKSETEFVSDRNFCGYSNLDTKAEVHDFVQGFSPKRNDVTVSGSSMVSNEAELAAQSNYPEKPVEACNIPKDPTASILKCSSVLDPNQSDGSSLQSSIPDENGISAEYHASVTDFVDNDGKISSIPRLVRKTKMRKHGDMTYEGDADWEVLINDQALNESQVMTDVERTLKTRMKHDSSLNTGEDSENVAVVAVSAGLKARKAGPIEKIKFKEILKRKGGLKEYLDCRNQILSLWSRDVTRILPLAECGVNDTDSEDGSPRSSLIREVYAFLDQYGYINVGIASQKENVGSSGRHCYKLVKEKGFEESLAASMVDSEDGVSFLVGQTKMSDASNEINNGLRKDCNDLTIEATEGMGHSNEVKVDLSNISQQEEGKVFDYQENDGFQDGTIGSSVPSSNFADCKLTSLIAKEKSNDSTCIKSVWDGQVGDNLQPDLDPRKRVIVIGAGPAGLTAARHLQRQGFPVTVLEARSRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDIVTEQKVPADMDEALEAEYNTLIDDMVLVVAQKGEQAMKMSLEDGLEYALKIRRMARTESSEETEQISADRPFDSKRDSSVEKKLDEEILSPQERRVMDWHFAHLEYGCAASLNDVSLPYWNQDDVYGGFGGAHCMIKGGYSSVVESLGEGIRIHLNHVVTNVSYGIKEPGQSYKVKVSTSNGNEFFGDAVLVTVPLGCLKAETIQFSPPLPQWKCSSVQRLGYGVLNKVALEFPSVFWDDAVDYFGATAEERNSRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGVSLSSSDHVKHALKVLRKLFGQDSVPDPVAYVVTDWGRDPFSYGAYSYVAVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLRESVRIIDILSTGNDYIAEVEALEASRGQLDTERDEVRDIIKRLDAVELSNIMYKNSLDGAQILTREALLREMFFNTKTTAGRLHVAKQLLTLPVGNLKSFAGSKEGLAILNSWILDSMGKDGTQLLRHCLRLLVRVSTDLLAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKEKASNGGLKLTRQTTAVDLSKRKSVKDSASGKPPLGTYHGTNENKGGLLNPTSAGSNSPSHAHVKKLHCKQGRQLPAYDSRHEVSSSRSKGSIDRVVTEEDNHCAISEEEQAAIAAAEAARAKALAAAEAYASAEARSNSLLQLPKIPSFHKFARREQSSQNDECDSRKRWSGGVFGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNLSQRSHSNEIASHLNFREHSGESAAGDSTIYTKAWIDTAGGVAIKDHHAIERWQSQAAAADSYFSNPTIHLKDEEDSNACSKLPSWKRDGVANESSISQVTVNKEALKSHSRAADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKFQVMEQATDAEKAMTVREFLDFRRKNKIRSFVDILIERHMTMKSDVKS 1904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00138 1904 Gene3D - 942 1268 - -
Viun8g00138 1904 Gene3D - 836 1311 IPR036188 -
Viun8g00138 1904 Pfam SWIRM domain 597 674 IPR007526 GO:0005515
Viun8g00138 1904 PRINTS Adrenodoxin reductase family signature 835 857 - -
Viun8g00138 1904 PRINTS Adrenodoxin reductase family signature 858 871 - -
Viun8g00138 1904 SUPERFAMILY FAD-linked reductases, C-terminal domain 1151 1262 - -
Viun8g00138 1904 ProSiteProfiles SWIRM domain profile. 584 684 IPR007526 GO:0005515
Viun8g00138 1904 SUPERFAMILY FAD/NAD(P)-binding domain 832 1315 IPR036188 -
Viun8g00138 1904 MobiDBLite consensus disorder prediction 1565 1588 - -
Viun8g00138 1904 MobiDBLite consensus disorder prediction 1571 1588 - -
Viun8g00138 1904 MobiDBLite consensus disorder prediction 1 110 - -
Viun8g00138 1904 MobiDBLite consensus disorder prediction 138 162 - -
Viun8g00138 1904 MobiDBLite consensus disorder prediction 1531 1548 - -
Viun8g00138 1904 FunFam Lysine-specific histone demethylase 1A 583 687 - -
Viun8g00138 1904 Gene3D - 583 687 IPR036388 -
Viun8g00138 1904 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1411 1494 IPR035441 -
Viun8g00138 1904 MobiDBLite consensus disorder prediction 1507 1553 - -
Viun8g00138 1904 MobiDBLite consensus disorder prediction 987 1008 - -
Viun8g00138 1904 MobiDBLite consensus disorder prediction 1 77 - -
Viun8g00138 1904 SUPERFAMILY Homeodomain-like 582 679 IPR009057 -
Viun8g00138 1904 Pfam Flavin containing amine oxidoreductase 844 1313 IPR002937 GO:0016491
Viun8g00138 1904 PANTHER FLAVIN MONOAMINE OXIDASE 834 1320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00138 Viun-Chr8 881727 893706 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Viun8g00138 Amino_oxidase 2.2e-105 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00138 8 881727 893706 Viun8g00138 8 881727 893706 ECH