Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00136 ATGATCGTGATTCTTCGTCCTTATTACCTCACCATTTCACTACTTATTCTCACTTCACCAAACTCATTCTTCACTAATCCCCATAACAAAATGAGACAAACTTTTTCAATCCCCTTCACAACTCTCCTCCTCGCCACCGTCACACTCCCGCCGCCGTCTGCCGTCGTCTCCGCCGCCTCCGGCCAGTGGCAGCTTCTCCAGAAAAGCATCGGCATTGTTGCCATGCACATGCAACTCCTCCACACCGACACTGTCCTCATCTTCGACCGCACCGACTTCGGCCTCTCCAACCTCTCCCTCCCCGGCGGCCGCTGCCGCCACGACCCTAACGAAAAGGTCGTCAAAACAGACTGCACCGCCCACTCCGTCGAATACAACGTCGCCAACAACACCTTCCGCGCGCTTTTCCTTCAAACAAACATATGGTGCTCCTCCGCCTCCGTCGCCGCCGACGGAACGCTGGTTCAAACCGGCGGCTTCAACGACGGCGAAAGGACCGTGCGAACATTCTTCCCTTGCCCCACCTGCGACTGGAAAGAAATCCCCGGCGGCCTCGCCGCGCGCCGCTGGTACGCCACCAACCAAAAACTCCCGGACGGGCGGCAGATCATCATCGGCGGCAGAAGAGAATTCAACTACGAGTTTTACCCGAAAAGCCACGCCACAGCCAAAAACATCTACTCCTTACCCTTCCTCGTTCAAACCAGAGATCCTTACGAAGAACTCAACCTCTACCCCTTCGTTTTCCTCAACGTAGATGGCACCCTCTTCATCTTCGCCAACAACAAAGCCATTCTCTTAGACTACACCAAAAACGCCGTCGTTAAAACGTTCCCCAACATTCCCGGTAACGACCCCAGGTGCTACCCTAGCACCGGTTCCGCTGTTCTCTTACCCTTACGTAGTAAAAACCCACACTTTTCTTTTGCCGAAGCTGAGGTTGTAATCTGTGGCGGAGCCCCGAGAGGGGCTTATAATCAAGCCAAAAAAAATCGTAAATTTATCAGAGCTTTGACCACCTGTGCCCGGATTAAAATAACCGACCCGAATCCAACCTGGGCCGTGGAGACAATGCCCGGAGGTAAAGGTAGAGTCATGGGCGATATGATTCTCCTTCCAAACGGCAACGTTTTGATCATTAACGGTGCAGGTTCCGGGAGCGCTGGCTGGGAATTCGGGCGCGACCCGGTTCTAGCTCCGTTACTTTATTACCCGGATAGGAAACCCGGGTCGAGGTTCGAGATTCTTAACGCCAGCAATATTCCTCGAATGTATCACTCAAGTGCGATTTTGGTTCGTGATGGAAGGGTTCTGGTTGCGGGGAGTAACCCTCACGTGGGGTACAATTTCTCGCACGTGACTTTCCCCACCGAGCTTAGTGTTGAAGCGTTTTCGCCGCCGTATTTGGAAGCGGCGTTTCAGAACGTGCGTCCGAGAATCGTTGGTCCGGTGTCGGGGACGAGGGTGGCCTATGGGCAGATAGTGAAGGTTCGGGTCGCCGTGGCGGGCAATCCTTTGGTTCGGAGTTTGGTGCGGGTGACGGTGCTGGCGCCGCCTTTCAACACGCACTCGTTTTCGATGAATCAGAGGATGCTGGTTCTGGAACCTAGAAACGTGACAAACGTTGATGGACCAACAACGTTTGAGATTGAGGTGACAACACCGGGTTCACCCGTTCTTGCACCACCCGGTTTTTATCTACTGTTTGTGGTCCACCAAGAAATTCCAAGCGAAGGAATTTGGATCCAGATACTTTAA 1758 0.5347 MIVILRPYYLTISLLILTSPNSFFTNPHNKMRQTFSIPFTTLLLATVTLPPPSAVVSAASGQWQLLQKSIGIVAMHMQLLHTDTVLIFDRTDFGLSNLSLPGGRCRHDPNEKVVKTDCTAHSVEYNVANNTFRALFLQTNIWCSSASVAADGTLVQTGGFNDGERTVRTFFPCPTCDWKEIPGGLAARRWYATNQKLPDGRQIIIGGRREFNYEFYPKSHATAKNIYSLPFLVQTRDPYEELNLYPFVFLNVDGTLFIFANNKAILLDYTKNAVVKTFPNIPGNDPRCYPSTGSAVLLPLRSKNPHFSFAEAEVVICGGAPRGAYNQAKKNRKFIRALTTCARIKITDPNPTWAVETMPGGKGRVMGDMILLPNGNVLIINGAGSGSAGWEFGRDPVLAPLLYYPDRKPGSRFEILNASNIPRMYHSSAILVRDGRVLVAGSNPHVGYNFSHVTFPTELSVEAFSPPYLEAAFQNVRPRIVGPVSGTRVAYGQIVKVRVAVAGNPLVRSLVRVTVLAPPFNTHSFSMNQRMLVLEPRNVTNVDGPTTFEIEVTTPGSPVLAPPGFYLLFVVHQEIPSEGIWIQIL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00136 585 PANTHER SECRETED PROTEIN-RELATED 53 584 - -
Viun8g00136 585 CDD E_set_GO_C 473 584 IPR015202 -
Viun8g00136 585 SUPERFAMILY Galactose oxidase, central domain 109 470 IPR011043 -
Viun8g00136 585 SUPERFAMILY E set domains 473 584 IPR014756 -
Viun8g00136 585 Gene3D Immunoglobulins 476 585 IPR013783 -
Viun8g00136 585 Pfam Glyoxal oxidase N-terminus 75 319 IPR009880 -
Viun8g00136 585 Gene3D - 57 474 IPR037293 -
Viun8g00136 585 Pfam Galactose oxidase-like, Early set domain 477 584 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00136 Viun-Chr8 873565 875621 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00136 8 873565 875621 Viun8g00136 8 873565 875621 ECH
Viun8g00136 8 873565 875621 Viun9g03644 9 41855576 41857731 PCT
Viun9g03645 9 41864817 41866623 Viun8g00136 8 873565 875621 PCT