Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00134 ATGGAAGGTGTTGATCAAAGTAATATGAAACGAAATGGTGGTGTATTTGGTTCATCATCAGGGGCAAATCTCAGGCCCCCAAATCGATTGAACACTGCTGTGCCTGTTGGTCAATTGGGTGTTGCTGAGAATCAGAAACCCTATGGAATACCACCCTCACACCCTAATACAAATATTTCACCTTCTTCACCCTATCCTCAGTTTTTTGCCTCCCAATCCCATTCCAATTCGGTTTCTCAGCGTTTGGGTTCTCCCAATTTGAGTTCTGCTTCATCCCATTCCAGGTCTCTGTCTCAGCCCTCTTTTTTCTCTCTGGATTCCTTGCCCCCATTGAGTCCTTCTCCTTACAGAGAGCCCTCCCTTTCTGACCCAATTTCAATGGATGTGTCTGCTGAGGAAAGCTTGGTTAACCCACATGCCCCTTTGCCTAATCGTGGTCCTTCACTTCAGCTTGGCCATTCTCTTCCACCTAGGAAAGGACACAGGCGATCCAGCAGTGATTCCCCTTTGGGAATTTCTGATTTTATTCAGTCTGCTCCTCAGTTGGTTCCCTCCAGGACTTGGAGTGATCGTGATGTTTCTAGGGGAGGGAACTCAGGATACGAGAAACCGATTCAGTTAGTGTTAAAGGAACCGATTAAGAGCATGGACCGTGGTGTTGATGGTTTTGCTGGGGAACCTGTGGTTGGGAGGAAAGAGGATGATTCTCTGGATGATTTGTTTAGTGCATACATGAATTTAGACAACATTGATGCTCTGAATTTTTCTGGTATGGAAGATAAAGATTTGGATAGCAGAACCAGTGGTTCCAAGACTGTTGAAAGCAGTGATAACGAAGTTGAGAGTCATGCAAATGGGAAAACAACTGGTGCTCAAGGGGCTAGTTCAAGCTGTTCAGAGGACAGAAGGGAAGGAGTGAAGAGGACTTCTAATGGAGACATTGCACCGGGTTCCCGACACCGGAGAAGTTACTCTTTGGACAGCTCCATTGGAAATTTTCATATTGGAGATGAATCACCTAAGCTTCCTCCTCTGCAAAACCGGGGTGGTCAACACTCGCCTAGCAATTCAATGGAGGGGAAGACTTCTGAAACAAGCATGGAGTTTGGAAATGGTGAATTCAGCTCGGAGGAGCTAAAGAAAATAAAGGAGAATGATAAGCTTGCTGAAATTGCCATGGCTGATCCTAAGCGTGCAAAAAGGATTTTGGCCAATCGGCTATCTGCTGCTCGCTCAAAGGAGCGGAAGATGCGATACATTTCTGAATTGGAGCTGAAAGTACAAACACTTCAGACAGAGACAACCACATTGTCCACTCAATTTACCAAATTACAGATGGACAATTCAGAGCTTAAAAGTGAGAACAATGAGTACAAATTGAGGATTCAAGCCTTGGAACAGCAATCCCAACTGAAAGATGCTCTGAATGAGACCTTGGATGCCGAAGTGCGGCGGTTGAGACGCACGGTTGCAGAACTCGGTGGCGAGTCCCTCCTCTCGAGCCGCATGGCTCAACAGCTTGCTATCAGCCAACAAATGTTCCCGTTACAGCACCAGCAGCACCCTAACCAGCTTAGACATGCTCAACTGCACAATAGCCATTCCCAGGAACAGACACAGACTCAGTCACAGCGACAGAATGGCAAAGCAACAGCCTACTGA 1662 0.4651 MEGVDQSNMKRNGGVFGSSSGANLRPPNRLNTAVPVGQLGVAENQKPYGIPPSHPNTNISPSSPYPQFFASQSHSNSVSQRLGSPNLSSASSHSRSLSQPSFFSLDSLPPLSPSPYREPSLSDPISMDVSAEESLVNPHAPLPNRGPSLQLGHSLPPRKGHRRSSSDSPLGISDFIQSAPQLVPSRTWSDRDVSRGGNSGYEKPIQLVLKEPIKSMDRGVDGFAGEPVVGRKEDDSLDDLFSAYMNLDNIDALNFSGMEDKDLDSRTSGSKTVESSDNEVESHANGKTTGAQGASSSCSEDRREGVKRTSNGDIAPGSRHRRSYSLDSSIGNFHIGDESPKLPPLQNRGGQHSPSNSMEGKTSETSMEFGNGEFSSEELKKIKENDKLAEIAMADPKRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNSELKSENNEYKLRIQALEQQSQLKDALNETLDAEVRRLRRTVAELGGESLLSSRMAQQLAISQQMFPLQHQQHPNQLRHAQLHNSHSQEQTQTQSQRQNGKATAY 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00134 553 SUPERFAMILY Leucine zipper domain 397 452 IPR046347 GO:0003700|GO:0006355
Viun8g00134 553 MobiDBLite consensus disorder prediction 346 369 - -
Viun8g00134 553 MobiDBLite consensus disorder prediction 50 108 - -
Viun8g00134 553 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 395 458 IPR004827 GO:0003700|GO:0006355
Viun8g00134 553 Gene3D - 396 462 - -
Viun8g00134 553 MobiDBLite consensus disorder prediction 282 299 - -
Viun8g00134 553 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 92 546 - -
Viun8g00134 553 MobiDBLite consensus disorder prediction 11 27 - -
Viun8g00134 553 Pfam bZIP transcription factor 397 455 IPR004827 GO:0003700|GO:0006355
Viun8g00134 553 MobiDBLite consensus disorder prediction 1 203 - -
Viun8g00134 553 FunFam Transcription factor VIP1 isoform A 395 457 - -
Viun8g00134 553 Coils Coil 413 433 - -
Viun8g00134 553 SMART brlzneu 393 457 IPR004827 GO:0003700|GO:0006355
Viun8g00134 553 MobiDBLite consensus disorder prediction 516 553 - -
Viun8g00134 553 Coils Coil 441 496 - -
Viun8g00134 553 MobiDBLite consensus disorder prediction 166 194 - -
Viun8g00134 553 CDD bZIP_plant_RF2 398 470 IPR044759 GO:0003700|GO:0006355
Viun8g00134 553 MobiDBLite consensus disorder prediction 259 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00134 Viun-Chr8 846415 849814 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun8g00134 bZIP_1 1.9e-10 CL0018