Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00114 ATGGCTCTCTTAACTTCCTTGCCTGAACACTCCACCACCCCAAAACGCCACAAACGACAACCTCAGCAGCAACAGCAACAGCAACAGAAACAGAAACAGAAGCAGAAACAAAAACCAGGTTCTTCATGGGATCAAATCAAGAACCTCTTAACCTGCAAACAGGTGGAAGGTTCGAGGGTTCATGACCCTTCCAAAGGGTACTCGAAGATAGGGTCTTCTTGCAGCTCCATATGCAGCTTCAGAGACGTTGTTCATGGGAACACACGTGTGGTGCATAGGTCTGATAACTCTTCACCGGAGAGTAGTTCTCTGGGTCAAGAAACCGGTTTACTCACAAGGAAACCGGTAACTGGTTCTACACGCTCCACACCCGCAAAATCAAACGCTGGAACAACCTACACGTCATCATCATCATCATCATCTTCTTCTTCCAGGGGAATGCAGTTCAGAAAGCTATCTGGCTGTTATGAATGTCACATGATCATTGACCCTAGCAGGTTACCAGTTGCAAGGAGCACTGTGTGTTCTTGCTCTCACTGTGGTGAGGTCTTCCCTAAAATGGAGAGTTTGGAGCTTCATCAAGCTGTTCGTCATGCTGTTTCGGAGCTGGGACCGGAGGATTCGGGGAGGAACATAGTGGAAATAATATTCAAGTCGAGCTGGTTGAAGAAGGATAATCCCATATGCAAGATCGAACGGATATTAAAAGTGCACAACACCCAACGCACCATCCAACGGTTCGAGGAGTGCAGGGACACGGTAAAGAACCGTGCGCTGGGGAGCACCAAGAAAAACCCTAGGTGTGCAGCCGACGGCAACGAACTCTTGCGGTTCCACTGCACCACCTTAACGTGCGCACTGGGCGCACGTGGGTCATCCTCGCTGTGCGCCTCCGTACCCGGCTGCGGTGTCTGCACAATCATCAGGCACGGTTTCCAAGGCGGCGGCGGAAACGACCACGCGAAAGGCAAGGGCGTGAGGACCACCGCAAGCAGCGGTAGGGCACACGACTCCGTCGTGTGCGGCGACGGCACGCGGAGGGCAATGCTGGTGTGCCGGGTGATTGCGGGGCGCGTGAAGCGCGTGGCGGAGGACACGCCGCCGTCGGAGGAGGAACACGTGTCGGTTGCGTCCTATGATTCTGTTGCCGGGTACGCTGGAATCTACTCGAATCTCGAGGAGTTGGTTGTTTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTGGTTATTTATAAAGTGCCTTCGTGTTAA 1251 0.526 MALLTSLPEHSTTPKRHKRQPQQQQQQQQKQKQKQKQKPGSSWDQIKNLLTCKQVEGSRVHDPSKGYSKIGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETGLLTRKPVTGSTRSTPAKSNAGTTYTSSSSSSSSSSRGMQFRKLSGCYECHMIIDPSRLPVARSTVCSCSHCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECRDTVKNRALGSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCGVCTIIRHGFQGGGGNDHAKGKGVRTTASSGRAHDSVVCGDGTRRAMLVCRVIAGRVKRVAEDTPPSEEEHVSVASYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYKVPSC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00114 416 Gene3D - 199 413 - -
Viun8g00114 416 ProSitePatterns Zinc finger C2H2 type domain signature. 175 198 IPR013087 -
Viun8g00114 416 MobiDBLite consensus disorder prediction 18 45 - -
Viun8g00114 416 ProSiteProfiles Zinc finger C2H2 type domain profile. 175 203 IPR013087 -
Viun8g00114 416 MobiDBLite consensus disorder prediction 1 45 - -
Viun8g00114 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 41 411 - -
Viun8g00114 416 MobiDBLite consensus disorder prediction 91 146 - -
Viun8g00114 416 SUPERFAMILY ADP-ribosylation 200 412 - -
Viun8g00114 416 FunFam C2H2-like zinc finger protein 199 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00114 Viun-Chr8 652969 656168 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun8g00114 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00114 8 652969 656168 Viun8g00114 8 652969 656168 ECH