Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00046 ATGGAGGAGCATAAGCAGGAAGAAAGCATGAAGCATTTGGGTGAAGAAGAAGGAGAAGAAGAATCGGTATCAGAATCGGTGCGGGATTTACCCTCCGACGCCGTGAAGGAGTTGCTGTCCGAAGGGGTATGCGCCCGTTGCATCTTTCGCCTCTTCGGCCTCCAAGGCCGCGTCTACGCTTCTTCTCCTTCCCTTTCTTCTGTCTCTTCACTCTCCGCCACCACACATCAACTTTGCACACTTTGCTTCGGTATTCTGCAGTTCACATATTATTCAGACGACACCCAAACCCTCCTTCAAAATCAGAACCTCCCACTTCTCATTGCTGACACCGTTAAACGACACGCCTATCAGTTCCATACCTTTTCCCTTGAAGTTTCCATCCCACCGATCATTCTCAGCAATGATAACTCTCTTCGCTCATATATGAAAACCAAATTCGGGTCTCAATCTTGGTTCCAAGAAAACTTGCACACTGGATGCATATCTACAAAGGATGCCTTAAAATTTTCTCTAATATATCCTCTTGAAAATCTTCTGGAATGTAAATCGAGTATGGGCCCTTTCCGCATTCGTTTGACCTACACTCACACAAAAGCATCGAAGGGGGATCAGAACCGGTCAGATAGTGCCGAGACTTGCAAGAGAAGAAAAATAGGAGAGTCCAATGTTGTTGCAGAAATACCTGTTGGCAATTCACTTGAGAATGATTCCTCTGACGGCTGTGAATTCTTGCTAGAAAAGGCAAACGAGCCTTGCCATTTTACTTTCTATTGCTACAGGACGCCTTTCTATTTTGGTGGAAGATACCTGAAGTATTCACGGAATGTGAGTCAAACATGCTGGATCATTGATGATGAAAGAATGGGAGAAGCCTCGGTTGAAGAAATAATTGGTGGAAAAATCCTCCAAGCCTGCCAAGGTGATAGTTTTAAGTTTCACGCTGCAGGCAGAGAAGATATCGATGTCCGAATGTTGGGTCCAGGCAGGCCCTTTCTTGTTGAGGTGCAAAATGCACGGCATATCCCATCTGAACTGTTTGTAAAAGATGTAGAGAGAAAGATAAATAACATGGAGAATAAATTGGTTAGGGTGAAAAATCTGAAACTTGTTGGTAGTGAAGGCTGGGACCTTATGCGTGAAGGTGAAGCAGAGAAGCAGAAACAATATGCTGCTTTAGTGTGGATATCTCGTCCTCTAAAGGATGAAGATTTTCAATGTATTTCTTCACACAAGGATTTGAAAGTTTTGCAGCGGACCCCAATAAGGGTGCTACATCGTCGCAGTCCTTTAGAACGGGAAAAGATTATTCATTGGATGAAAATAGAGGCAATTGCTGGAAGTTCCCAATATTTTCTTCTGCACCTATGTACACAGGCTGGGACCTATATCAAGGAATTTGTTCATGGAGATCTTGGACGCACCCATCCTAGCATTGGATCAATTTTGGGTTGCAGAGCTGAAATTTTGCAACTTGATGTCACAGACATAAAAATGGAATGTTTCCTGACATAA 1515 0.4356 MEEHKQEESMKHLGEEEGEEESVSESVRDLPSDAVKELLSEGVCARCIFRLFGLQGRVYASSPSLSSVSSLSATTHQLCTLCFGILQFTYYSDDTQTLLQNQNLPLLIADTVKRHAYQFHTFSLEVSIPPIILSNDNSLRSYMKTKFGSQSWFQENLHTGCISTKDALKFSLIYPLENLLECKSSMGPFRIRLTYTHTKASKGDQNRSDSAETCKRRKIGESNVVAEIPVGNSLENDSSDGCEFLLEKANEPCHFTFYCYRTPFYFGGRYLKYSRNVSQTCWIIDDERMGEASVEEIIGGKILQACQGDSFKFHAAGREDIDVRMLGPGRPFLVEVQNARHIPSELFVKDVERKINNMENKLVRVKNLKLVGSEGWDLMREGEAEKQKQYAALVWISRPLKDEDFQCISSHKDLKVLQRTPIRVLHRRSPLEREKIIHWMKIEAIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDIKMECFLT 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00046 504 PANTHER UNCHARACTERIZED 72 501 IPR039894 -
Viun8g00046 504 Gene3D - 388 498 - -
Viun8g00046 504 MobiDBLite consensus disorder prediction 1 29 - -
Viun8g00046 504 Gene3D - 264 387 - -
Viun8g00046 504 Coils Coil 348 368 - -
Viun8g00046 504 FunFam tRNA pseudouridine synthase Pus10 263 387 - -
Viun8g00046 504 FunFam tRNA pseudouridine synthase Pus10 388 498 - -
Viun8g00046 504 NCBIfam tRNA pseudouridine(54/55) synthase Pus10 261 498 - -
Viun8g00046 504 SUPERFAMILY Pseudouridine synthase 380 498 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00046 Viun-Chr8 231733 236794 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00046 8 231733 236794 Viun8g00046 8 231733 236794 ECH