Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03850 ATGGGATTAAAATTTGAAAAGCCCATGCTCATCCACAGGGCAAGTGGGTCACCACGAGAAATCGCTCTGATTAGAAATCTACCCAATGAGGAAGCAGAGAAAAGGATGAACTTTCCATGTTCCACCAATGAAAAACCAGATAAGGCGTTGCATTGTGGACCCCAAAGTTCACTCCCTTTCACTGTAGGAGGTCCCAAAAGTGCAAACCCGAACGATCTCTCACTGTTAAATGGAATGCAAAAGCGTCTCTGTGGGTCACCGTTCACACTCACACACACCCCTTTTTCATCCAAAATAATAATCATTGTATCGTATTCCCTCCCCTGTAACCAAACCCACACTGTAACCCGATTCCCCCGTTTGATATTTGGCTTCAAATTTTGTTTGGGTGTGATGAGTACAGCAAAGAACGCGGCAAACGCGGTTGGAGGCAAAACGGCAAGAGCATGCGACAGCTGCATAACCAAGCGGGCACGTTGGTACTGTGCCGCTGATGATGCTTTTCTCTGCCAGGCCTGTGACTCTTCGGTTCACTCCGCCAATCCTTTGGCTCGCCGGCACGAAAGAGTTCGCTTGAAAACGGCGTCGTACAAGTCCACCGACGAACAACAACAACAACAGCAACCTCCCACTTGGCACACTAAGAAAGCTCGAACGCCCCGACACGGGAAACACTCTCGTAGCAACAATCCCTTCCATCTGGTCCCGGAAGTGGGTTCGGAAGAGGTGAATTCCCATGACGAGAACGAGGAGCAGCTTCTTTACAGGGTCCCCATATTCGACCCTTTTGTTGCTGAGCTATGTGGGACCAATAGCTCTTCTCCTTCTTCGGTGACTTCAACTGATCAAGGAGCAGCAGCTGCCGTGGCCGAGGCCGAAAACAAAGGGTTTCAGAGCAATGTTTTTCATCACAGTAATAATGAGATGGAAAACCTGCATGGGATGCTTCCTTCCGACGCAGAACTTGCTGAGTTTGCGGCTGATGTTGAGAATTTACTGGGTAGGGGGCTTGAAAACGAGTGCGTGGGGATGGAGGATTTGGGACTGATTGATGCGAAGGAGGAGGAGTGTTCGGTGGGTAGTGGGGTGAAGGTGGAAGAGGAAGAGAGCCCTGAGATGGAGATGGAGATGGTGGGGAGAGATGTATCGTTTGAGTTTAGCTTTGATTATGAGACGTGTGAAGAGGTGAAGGAGAAGATTTGTGATTTTGAATTGGGGAAGGAGAAGGGGAATGAAGAAGAACTGGGAGAGAATGATGAGGTGAAAAAGAAGAAGATATCGTTGCAGCTTGATTACGAGGCAGTGATTATCGCCTGGGCTAGCCAAAAGTCTCCTTGGACCACTCCTGACAAACCAAACTTGGACCCCGACGAGTGCTGGCACGAATGCATCGAAAGTTATGGAAGGGGAATTCATGATCCTTATGGTGAAGTGGGTGGATTTGGGATTCATCCGGTGATAATTGACGGAGGCAGAGAGGCAAGAGTGTCAAGGTACAGAGAAAAGCGCCGAACAAGGTTGTTCTCCAAGAAAATAAGGTACGAGGTTAGGAAATTGAATGCAGAGAAGAGACCCAGAATGAAGGGGAGGTTTGTCAAGAGGGCTTCCTTTGCACCATCCACATTTCCCTTGCTAAATCATTAA 1644 0.486 MGLKFEKPMLIHRASGSPREIALIRNLPNEEAEKRMNFPCSTNEKPDKALHCGPQSSLPFTVGGPKSANPNDLSLLNGMQKRLCGSPFTLTHTPFSSKIIIIVSYSLPCNQTHTVTRFPRLIFGFKFCLGVMSTAKNAANAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTASYKSTDEQQQQQQPPTWHTKKARTPRHGKHSRSNNPFHLVPEVGSEEVNSHDENEEQLLYRVPIFDPFVAELCGTNSSSPSSVTSTDQGAAAAVAEAENKGFQSNVFHHSNNEMENLHGMLPSDAELAEFAADVENLLGRGLENECVGMEDLGLIDAKEEECSVGSGXVKVEEEESPEMEMEMVGRDVSFEFSFDYETCEEVKEKICDFELGKEKGNEEELGENDEVKKKKISLQLDYEAVIIAWASQKSPWTTPDKPNLDPDECWHECIESYGRGIHDPYGEVGGFGIHPVIIDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAPSTFPLLNH 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03850 548 MobiDBLite consensus disorder prediction 197 214 - -
Viun7g03850 548 CDD Bbox1_BBX-like 149 192 - -
Viun7g03850 548 SMART bboxneu5 145 192 IPR000315 GO:0008270
Viun7g03850 548 Pfam B-box zinc finger 147 190 IPR000315 GO:0008270
Viun7g03850 548 ProSiteProfiles CCT domain profile. 493 535 IPR010402 GO:0005515
Viun7g03850 548 MobiDBLite consensus disorder prediction 188 235 - -
Viun7g03850 548 ProSiteProfiles Zinc finger B-box type profile. 145 192 IPR000315 GO:0008270
Viun7g03850 548 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 139 537 - -
Viun7g03850 548 Pfam CCT motif 493 535 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03850 Viun-Chr7 38611803 38613738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03850 136 535 C2C2-CO-like Transcription Factor Family AT1G25440 46.539 3.91e-100 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Viun7g03850 zf-B_box 1.2e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03850 7 38611803 38613738 Viun7g03850 7 38611803 38613738 ECH