Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03844 ATGAGGCTTTCCATACTGCAACCTCAGCCGCAGCGCTGTCACCATCCCATAAAGCGGTGGCCTCGCATGGACGCCTCCTTCCACCGCCGCAAGGACAAGGTCGTTGTCATCATGGGCGCCACCGGCTCCGGCAAGTCCCGTCTCTCCATCGACCTCGCCACCCTCTTCCCCGTCTCCGAAATCATCAACTCCGACAAAATGCAAGTCTACCGCGGACTCGACATCACCACCAACAAGATCCCCCTCGCGCAGCGCCGCGACGTCCCCCACCACCTCCTCGGCGACGTCGACCCCTCCCTCCCGGAGTTCTCCCCCGTCGACTTCCGTCGCCGCGCTGCCCACATCATCGACGACATCACCAGCCGGGATTGCCTCCCCATCGTCGTCGGCGGCTCTAACTCCTTCGTCCACGCGCTTCTCGTGGAAAACTTCCAGCCCGACTCCAACGTCTTCCAACACGGCGAGGGGCTTATATCCTCCGAGCTGAGGTACAGGTGTTGCTTCCTCTGGGTCGACATAGCCTTCCCTGTGCTATCGCAATACCTGTGCCACCGAGTCGACGACATGCTCCAATCGGGGATGGTCGACGAGTTGGCTCAGTTCTTCGACCCTGAGGCTTCCCGTCGAACCGGGTCCGGTCTCAGAAAAGCCATTGGGGTTCCCGAGTTCGACCGCTTTTTTAATATGTACCCACCCTGGGCCGGCCCCGCGGGCCCGGGCGAGGATCCTCTGCGGAAGCGTGCGTACGAGGAAGCGGTGCGGGCGATCAAGGATAACACGTGCGAGTTGGCGGAGCGTCAGATGGAGAAGATCGAACGGTTGAAGCGCGCCGGGTGGGACCTACGGAGGATCGACGCTACGGAAGCGTTTCGAGTGGTGCTGACGTCAGGGTCCAACAATGGGTCCGATGTATGGGAGAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 972 0.6091 MRLSILQPQPQRCHHPIKRWPRMDASFHRRKDKVVVIMGATGSGKSRLSIDLATLFPVSEIINSDKMQVYRGLDITTNKIPLAQRRDVPHHLLGDVDPSLPEFSPVDFRRRAAHIIDDITSRDCLPIVVGGSNSFVHALLVENFQPDSNVFQHGEGLISSELRYRCCFLWVDIAFPVLSQYLCHRVDDMLQSGMVDELAQFFDPEASRRTGSGLRKAIGVPEFDRFFNMYPPWAGPAGPGEDPLRKRAYEEAVRAIKDNTCELAERQMEKIERLKRAGWDLRRIDATEAFRVVLTSGSNNGSDVWERQVLEPSVKIVKRFLME 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03844 323 Coils Coil 257 277 - -
Viun7g03844 323 Pfam IPP transferase 68 144 - -
Viun7g03844 323 Pfam IPP transferase 161 269 - -
Viun7g03844 323 Gene3D - 31 321 IPR027417 -
Viun7g03844 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 175 281 - -
Viun7g03844 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 321 IPR039657 -
Viun7g03844 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 205 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03844 Viun-Chr7 38508517 38510192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03844 163 321 C2H2 Transcription Factor Family AT2G27760 30.387 8.91e-14 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03844 7 38508517 38510192 Viun7g03844 7 38508517 38510192 ECH