Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03776 ATGACTGGTAGCGGTGACTGTAAATTGTCATGCCTGGATTCTTTCTCGATTGGATCTAAATCTATGGTAGCCCTATCATTAGCTGAATTGCCTGGAGATTGTGGGCAAATTGTCCTCGCAATGGGAGGATTGGATAACAAAGTTCATCTTTATTGTGGTGGAAGGACAGGAAAGCTTGTACATGCATGTGAGCTAAAAGGCCATACAGATTGGATCCGGAGTTTGGACTTCTCATTGCCTATAAATGTGAATGGGGAAGCAAACAATATTTTTCTGGTTAGTTCATCTCAGGATAAAGGCATACGAATTTGGAAGATGGCATTACGCAGCTCTATGTTGAATGGAAATGGCATATACAAGAAAGGGGAAATAAGCTTATCATCCTATATAGAAGGTCCTGTACTTTTGGCTGGTTCATCTTCTTTTCAGATATCCTTAGAATCTCTTTTAATTGGACATGAGGATTGGGTATATTCAGTAACGTGGCAACCCCCCTTGGTTTCATCCCTAGAAGGGGATACCTATTATCAACCACAAAGTATCTTATCTGCATCTATGGACAAGACTATGATGATCTGGCAACCTGAAAAGACTTCTGGTGTCTGGATGAATGTTGTCACTGTTGGGGAACTAAGCCACTGTGCTCTGGGTTTCTATGGTGGTCATTGGAGCCCCAATGGAGATTCAATTTTAGCACATGGATATGGTGGATCTTTCCATCTTTGGAGAAATGTTGGTAATGATAATTGGCTGCCACAAAAGGTTCCCTCTGGTCATTTTGCACCTGTTACTGATATTTCCTGGGCTAGATCTGGTGATTATATTATATCTGCCAGTCACGACCAGACAACTAGAATTTATGCTCCATGGAAAGTTGAGGCTTCTCTCCAAGATGGAGGATTTTGGCATGAAATATCTCGTCCTCAAGTTCATGGTCATGATATAAATTGTTTGGCAGTTATTCATGGGAAGGGTAATCATCGTTTTGTCAGTGGAGCTGATGAAAAAGTTGCCAGAGTATTTGAAGCCCCGTTATCATTTCTTAAGACATTAAATAATGCTACTCTGCAGAAGTCTTGTTCTTCTGATGATATCTTAGGAAATGTTCAGATTTTGGGTGCAAACATGTCAGCTCTTGGACTATCACAGAAACCTATTTATGTTCAAGCTGTGCATGAGATCCCCGAGAGAAGTGGCATCGATGGTATTGACACCCTTGAAACTATTCCGGACGCTGTTCCAACTGTTTTCACCGAACCTCCAATTGAAGATCAACTGGCTTGGCATACACTTTGGCCTGAATCACATAAACTATATGGGCATGGAAATGAACTATTTTCTTTATGCTGCGATCATAGGGGTGAGCTTGTTGCTTCTTCATGTAAGGCTCAGTCTGCTGCTGTGGCAGAGGTATGGCTTTGGCAGGTTGGTTCATGGAAAGCCGTTGGCCGCTTGCAATCCCACAGTTTAACAGTGACACAGATGGAATTCTCACATGACGACAACTTTCTTTTAACTGTCTCAAGGGATCGTCAGTTCTCTGTTTTTTCAATCACAAGAACAGGGTCCGGTGAAATCAATTATAGTCTTCTTGCGAGGCAGGAGGGGCACAAGCGGATTATCTGGTCATGTTCATGGAATCCTCATGGTCATGAATTCGCAACAGGCTCACGGGATAAGACGGTGAAAATCTGGGCCGTTGAAAAGGATTCATCCATCCGACAGCTTATGACTTTGCCTCCATTTATGAGTAGTGTGACAGCGTTATCTTGGGTTGGTCTCCATAATCAAAGGGATCACGGACTTCTAGCTGTTGGAATGGAAAATGGGCAAATAGAATTGTGGAATCTATCTTATAACAGAGCAGATGATGGTTGCATAGCAGCACCAGGTTTGGTTGCTGCTCTTGTCGTACGTATAGATCCTTTTATATGCCATGCCTCTGCTGTAAACCGCTTAGCGTGGAAGAAAAATCAGGAAGATCACACGAGTCTTCAACTTGCTTCTTGCGGAGCTGATAATTGTGTAAGAGTGTTTGATGTAACGGTTTAG 2052 0.425 MTGSGDCKLSCLDSFSIGSKSMVALSLAELPGDCGQIVLAMGGLDNKVHLYCGGRTGKLVHACELKGHTDWIRSLDFSLPINVNGEANNIFLVSSSQDKGIRIWKMALRSSMLNGNGIYKKGEISLSSYIEGPVLLAGSSSFQISLESLLIGHEDWVYSVTWQPPLVSSLEGDTYYQPQSILSASMDKTMMIWQPEKTSGVWMNVVTVGELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWRNVGNDNWLPQKVPSGHFAPVTDISWARSGDYIISASHDQTTRIYAPWKVEASLQDGGFWHEISRPQVHGHDINCLAVIHGKGNHRFVSGADEKVARVFEAPLSFLKTLNNATLQKSCSSDDILGNVQILGANMSALGLSQKPIYVQAVHEIPERSGIDGIDTLETIPDAVPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCDHRGELVASSCKAQSAAVAEVWLWQVGSWKAVGRLQSHSLTVTQMEFSHDDNFLLTVSRDRQFSVFSITRTGSGEINYSLLARQEGHKRIIWSCSWNPHGHEFATGSRDKTVKIWAVEKDSSIRQLMTLPPFMSSVTALSWVGLHNQRDHGLLAVGMENGQIELWNLSYNRADDGCIAAPGLVAALVVRIDPFICHASAVNRLAWKKNQEDHTSLQLASCGADNCVRVFDVTV 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03776 683 Gene3D - 7 139 IPR015943 GO:0005515
Viun7g03776 683 ProSiteProfiles Trp-Asp (WD) repeats profile. 485 518 IPR001680 GO:0005515
Viun7g03776 683 PRINTS G protein beta WD-40 repeat signature 181 195 IPR020472 -
Viun7g03776 683 PRINTS G protein beta WD-40 repeat signature 553 567 IPR020472 -
Viun7g03776 683 PRINTS G protein beta WD-40 repeat signature 92 106 IPR020472 -
Viun7g03776 683 ProSiteProfiles Trp-Asp (WD) repeats profile. 65 114 IPR001680 GO:0005515
Viun7g03776 683 SUPERFAMILY WD40 repeat-like 37 619 IPR036322 GO:0005515
Viun7g03776 683 Pfam WD domain, G-beta repeat 64 105 IPR001680 GO:0005515
Viun7g03776 683 Pfam WD domain, G-beta repeat 150 193 IPR001680 GO:0005515
Viun7g03776 683 Pfam WD domain, G-beta repeat 252 287 IPR001680 GO:0005515
Viun7g03776 683 Pfam WD domain, G-beta repeat 535 565 IPR001680 GO:0005515
Viun7g03776 683 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 534 568 - -
Viun7g03776 683 Gene3D - 140 254 IPR015943 GO:0005515
Viun7g03776 683 Gene3D - 255 365 IPR015943 GO:0005515
Viun7g03776 683 SMART WD40_4 431 475 IPR001680 GO:0005515
Viun7g03776 683 SMART WD40_4 56 105 IPR001680 GO:0005515
Viun7g03776 683 SMART WD40_4 527 566 IPR001680 GO:0005515
Viun7g03776 683 SMART WD40_4 204 243 IPR001680 GO:0005515
Viun7g03776 683 SMART WD40_4 572 616 IPR001680 GO:0005515
Viun7g03776 683 SMART WD40_4 249 288 IPR001680 GO:0005515
Viun7g03776 683 SMART WD40_4 301 342 IPR001680 GO:0005515
Viun7g03776 683 SMART WD40_4 478 517 IPR001680 GO:0005515
Viun7g03776 683 SMART WD40_4 636 680 IPR001680 GO:0005515
Viun7g03776 683 SMART WD40_4 143 194 IPR001680 GO:0005515
Viun7g03776 683 Gene3D - 422 525 IPR015943 GO:0005515
Viun7g03776 683 ProSiteProfiles Trp-Asp (WD) repeats profile. 256 287 IPR001680 GO:0005515
Viun7g03776 683 FunFam Elongator acetyltransferase complex subunit 2 213 524 - -
Viun7g03776 683 ProSiteProfiles Trp-Asp (WD) repeats profile. 534 575 IPR001680 GO:0005515
Viun7g03776 683 Gene3D - 526 683 IPR015943 GO:0005515
Viun7g03776 683 PANTHER ELONGATOR COMPLEX PROTEIN 2 9 682 IPR037289 GO:0002098|GO:0033588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03776 Viun-Chr7 38103922 38109283 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03776 7 38103922 38109283 Viun7g03776 7 38103922 38109283 ECH