Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03749 ATGCTCTCGGTCACGCAACCTTCGTGCATTCCCAAAACCCTAAAACCCTTCATTCCCCTTCCGTCTCCGGCCATGAAGGACCGCCGCGCGCTGTCCTCCTATGGCTCCGTTTACATTCCGCCGCACCACCGTTTGCGCTCCGTTGCTAATTTCAACAACTCACCCTCTCCGTTTCGCGCCAAACCCCACGAAAACCCTACACACACCATTTCTACTCTGCAACCGCCGTTCACGGAACGAGTTACCGATAAGGCACGTTCGCGCTTCGTTTCTGCTTATGACGATACCGTTTCCGAGGAAGGCTCCGATCATGAATTCGAACTTCCCTCAGTAGTGCGTGTTTCCAAATTTGCTTGTCCTAATGCTTCGCTTGATGATAACACTGACGAGTGGAAGCGGAAATTTACCGTGCTCTTAAATGACAAGAGTAAGCACGAATTAATCTCGAGAGAGAAAAGGGATAGGCGTGATTTTGATCGAATAGCAGTTATTGCAAGCGGAATGGGATTGTATAGCCATATCTATGCTAAGGTTGTTGTCTTCAGTAAGGTCCCACTTCCAAATTACAGATATGATTTGGACGATCGGAAGCCTCAGAGGGAGGTGAGCTTGTCTTTCACCACATTTACCCGTGTTAAGGAGCATTTTGAGGAATATCTTAGCCAAAAATCCAGGATGAACAAAAGCTGTTTGGATTTTTCATCTGCAAGATCCAGCAGTAATTGCAGTATTGGTATGGATGAGGGGCTTTTTGAGCAACCTGAGCCACTAGCATCAAGTAAGGGTGTTATGGAGAAAATTGTTTGGCAGAGGAGCTTACAAATGCGTGATCAGCAGCAAGCTTGGCAGGAATCTGCTGAAGGAAGTAGAATGCTAGAATTTCGCAGAAGTCTCCCGGCTTATAAAAAGAAAGAAGACATATTATCAGTCATATCAAGGAATCAGGTAGTTATCATTTCAGGCGAAACAGGTTGTGGCAAGACAACACAAATTCCACAATTCATTTTAGAATCTGAGATAGAATCAGTTCGTGGAGCTTCTTGTAATATCATATGCACACAGCCCAGACGCATTTCAGCCATGTCAGTTTCTGAAAGAGTGGCCTATGAGAGGGGAGAGAAATTGGGCGAATCTGTTGGATATAAAGTTCGACTTGAGGGTATGAAAGGGAGAGATACCCATCTTCTCTTTTGCACCACAGGCATTTTATTAAGAAGATTACTAGCAGATAGAAAGTTAAAAGGCGTAACTCATGTTATTGTGGATGAAATTCATGAGCGTGGGATGAATGAAGATTTTCTGCTTATTATCCTTAAAGAACTCCTTCCCTTTCGGCCAGAACTGAAACTGATTTTGATGAGTGCTACCCTAGATGCAGAGCTCTTTTCTTCATACTTTAATGGGGCTCCGACTATGTTTATTCCTGGCTTCACATACCCCGTCAAAACCCATTTTTTGGAGAACATTCTTGAAATGACGGGCTACAGATTAACTCCTTATAATCAAATTGATGATTATGGTCAAGAAAAGATGTGGAAAATGAACAGACAGGTCCCAAGAAAGAGGAAAAGTCAAATTGCTTCTGCGGTAGAGGATGCAATTAGAGCTGCTGATTTCAAAGATTACAGCCCACATACACAGGAGTCTTTGTCATGTTGGAATCCTGACTGCATTGGTTTTAGTCTCATAGAATATATTTTGTGCAATATATGTGAGAATGAAAGACCTGGTGCTGTTTTGGTTTTCATGACTGGATGGGATGATATAAGCTGTCTGAAAGAGAAACTCCTGACTCATACTGTCTTGGGAGATCCAAACCGTGTTCTGTTGCTTACATGTCATGGCTCAATGGCTAGCTCAGAGCAGAGATTAATATTTGAAGAGCCTGAAGCTGGAGTAAGAAAAATAGTGCTAACAACAAATATTGCCGAAACCAGTATCACGATAAATGATGTTGTCTTTGTTCTTGACTGCGGAAAAGCGAAAGAAACATCGTATGATGCTCTGAACAACACACCTTGTCTGCTCCCTACATGGATTTCTAAGGTTTCTTCTCAACAAAGAAGAGGAAGAGCTGGTCGAGTACAACCAGGAGAGTGTTACCATCTCTATCCTAGATGTGTGTATGATGCATTTGCGGAGTATCAATTGCCAGAAATTTTGAGAACACCTCTGCAATCCCTCTGTTTACAAATTAAAAGTTTAAGACTTGGAAGCATATCTGAGTTCTTGTCCAGGGCTTTGCAGTCTCCTGAGATACTTGCGGTACAAAATGCAATTGAATATTTAAAAATAATTGGAGCTTTGGATGAGACTGAGAATCTCACTATTCTAGGGCGCTATTTGACAATGCTTCCTATGGAACCCAAACTTGGCAAGATGCTAATATTAGGTGCTATTTTCAATTGCCTGGATCCCATATTAACTGTTGTTGCTGGTCTTAGTGTGAGAGATCCTTTTCTAACACCGTTGGATAAAAAAGATCTTGCAGAGGCTGCAAAAACTCAATTCTGTGGTGCATATAGTGACCACCTTGCACTTGTAAGGGCACATGAAGGTTGGAAAGATGCTGAAATGGACATGGGTGGATATGAATACTGTTGGAAAAACTTTCTTTCCTTACAATCCATGAAAGCTATTGATGCTCTGCGGAGAGAGTTCATATGCCTGCTCAAGGATACCGGATTAGTTGATAGTAACGCAGCCAGCTGCAATGCATGGAGCTCAGATGTAAATCTTATCCGAGCAGTTATTTGCTATGGCCTATATCCTGGAATTGCTTCTGTTGTGAATAATGAGAAATCATTCTCTTTGAAAACAATGGAGGATGGACAAGTGCTCCTATATTCGAACTCAGTGAATGCTCGGGAAACTAAAATTCCATATCCATGGCTTGTTTTTAACGAGAAGATAAAAGTGAACTCGGTTTTTCTCCGCGACTCTACAGCTGTGTCTGATTCAATGGTGCTTCTGTTTGGAGGAAGCTTATTGAAAGGAGATGCTTTAATTTTTCCAAGAATGGGCATACAGTGGTATCATGATCTCCTATATGCAGTACGGCTGCTGATTTCCAATGACAAATGTGAAGGTAGATTTGTATTTGGTCGCCAGGTCCATAAACCATCTAAGAAATCTATTATGTTGGCCTCACACCCAACCTTGGTTTCAAGGACTGAGAGTGGACCTGGGGGAGATAATTCTAAAAGTCAGCTCCAAACATTGCTTACGAGAGCAGGATGTGCAGCACCCGTCTACAAGACTAGACAATTGAAGAACAATCAGTTTCAGGCTGCAGTTGAATTCAATGGAATGCAGATAATGGGTCAACCTTGTAACAATAAAAAGAGTGCAGAAAAAGATGCTGCAGCTGAGGCATTGCAGTGGCTGATGGGTGGAAAGCAAGCAGGCAGGGAGTATATCAATCACTTGTCAATGTTACTTAAGAAAAGTAAGAAGGATCACAATTAA 3468 0.4216 MLSVTQPSCIPKTLKPFIPLPSPAMKDRRALSSYGSVYIPPHHRLRSVANFNNSPSPFRAKPHENPTHTISTLQPPFTERVTDKARSRFVSAYDDTVSEEGSDHEFELPSVVRVSKFACPNASLDDNTDEWKRKFTVLLNDKSKHELISREKRDRRDFDRIAVIASGMGLYSHIYAKVVVFSKVPLPNYRYDLDDRKPQREVSLSFTTFTRVKEHFEEYLSQKSRMNKSCLDFSSARSSSNCSIGMDEGLFEQPEPLASSKGVMEKIVWQRSLQMRDQQQAWQESAEGSRMLEFRRSLPAYKKKEDILSVISRNQVVIISGETGCGKTTQIPQFILESEIESVRGASCNIICTQPRRISAMSVSERVAYERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRKLKGVTHVIVDEIHERGMNEDFLLIILKELLPFRPELKLILMSATLDAELFSSYFNGAPTMFIPGFTYPVKTHFLENILEMTGYRLTPYNQIDDYGQEKMWKMNRQVPRKRKSQIASAVEDAIRAADFKDYSPHTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISCLKEKLLTHTVLGDPNRVLLLTCHGSMASSEQRLIFEEPEAGVRKIVLTTNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSSQQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDETENLTILGRYLTMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKTQFCGAYSDHLALVRAHEGWKDAEMDMGGYEYCWKNFLSLQSMKAIDALRREFICLLKDTGLVDSNAASCNAWSSDVNLIRAVICYGLYPGIASVVNNEKSFSLKTMEDGQVLLYSNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSMVLLFGGSLLKGDALIFPRMGIQWYHDLLYAVRLLISNDKCEGRFVFGRQVHKPSKKSIMLASHPTLVSRTESGPGGDNSKSQLQTLLTRAGCAAPVYKTRQLKNNQFQAAVEFNGMQIMGQPCNNKKSAEKDAAAEALQWLMGGKQAGREYINHLSMLLKKSKKDHN 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03749 1155 SMART ultradead3 296 484 IPR014001 -
Viun7g03749 1155 Gene3D - 738 840 - -
Viun7g03749 1155 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 562 736 IPR001650 -
Viun7g03749 1155 SUPERFAMILY dsRNA-binding domain-like 1062 1133 - -
Viun7g03749 1155 SMART ha2_5 758 848 IPR007502 GO:0004386
Viun7g03749 1155 CDD DEXHc_RHA-like 314 474 - -
Viun7g03749 1155 MobiDBLite consensus disorder prediction 54 77 - -
Viun7g03749 1155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 856 IPR027417 -
Viun7g03749 1155 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 914 995 IPR011709 -
Viun7g03749 1155 Pfam Helicase associated domain (HA2) 759 832 IPR007502 GO:0004386
Viun7g03749 1155 FunFam DExH-box ATP-dependent RNA helicase DExH3 252 476 - -
Viun7g03749 1155 CDD SF2_C_RHA 542 704 - -
Viun7g03749 1155 Gene3D - 258 476 IPR027417 -
Viun7g03749 1155 SMART DRBM_3 1067 1130 IPR014720 -
Viun7g03749 1155 PANTHER ATP-DEPENDENT RNA HELICASE 248 998 - -
Viun7g03749 1155 Pfam Double-stranded RNA binding motif 1067 1129 IPR014720 -
Viun7g03749 1155 Pfam Helicase conserved C-terminal domain 564 695 IPR001650 -
Viun7g03749 1155 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 308 475 IPR014001 -
Viun7g03749 1155 FunFam Putative ATP-dependent RNA helicase DHX36 738 842 - -
Viun7g03749 1155 Pfam DEAD/DEAH box helicase 307 458 IPR011545 GO:0003676|GO:0005524
Viun7g03749 1155 SMART helicmild6 587 696 IPR001650 -
Viun7g03749 1155 Gene3D - 1046 1134 - -
Viun7g03749 1155 FunFam DExH-box ATP-dependent RNA helicase DExH3 1045 1134 - -
Viun7g03749 1155 Gene3D - 561 715 IPR027417 -
Viun7g03749 1155 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1066 1131 IPR014720 -
Viun7g03749 1155 FunFam DExH-box ATP-dependent RNA helicase DExH3 558 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03749 Viun-Chr7 37937621 37950432 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03749 7 37937621 37950432 Viun7g03749 7 37937621 37950432 ECH