Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03726 ATGGCCGCGTCGCCGTCGTCCTCCGCTAACATCGTGCTCGCGATCTTCGAGAAGAAGACCAATACCGTTGATATGTATCGCCCCCTCCGCAATTACGTGGCGTATCACTACTCCGAGCGCGAAGCGCAGAACGTCGAAGACGATCTACAAACCCTAAAGCAACTTCGCTACGAAATCGAACGTCACCTCGATCCGTCCCTGCCGGCGCGCCGCGATGTCCTCCAAACCTACTTCAAATCTCTTTGCCTTGTCGAGACGCGCTTCCCAATCTCCTCCGACCCTGACCACGTCAACGCCCTCACCTTTGTATGGTTCGATGCCTTCAAGCCAAAGCAGAAGGCCTCGCAGCAGAACATCCACCTCGAGAAGGCCGCCGTGCTCTTCAATTTGGGCGCTGTTTACAGTCAGATTGGATGTTCCTACGATCGGAACACCGTTGACGGCCGCCGCCAGGCCTCGCATGCCTTCATTGCTGCTGCTGGTTCCTTTGCCTTCCTCCGTGACAACGCCTCTATGAAGGCATCCGTTGGGAATTCCACCACTGTTGATTTGTCCGTTGAGTGTGCTGGGATGCTGGAGAAGCTCATGCTCGCGCAGGCGCAAGAGTGCGTCTTCGAGAACACCATTGCTAAAGGGAGCACTCCCGGTGTCTGTGCCAAGATCTCCAGACAGGTTGGGATATATTACGAGGAAGCTTTAGCTGCACTGAATGTTGCACCTTTGAGCCAGCATTTTGAAAAGTCCTGGATAGTTCATGTACAGTTAAAGGCTGCACTGTTCTATGCAGAAGCTTGTTATAGGTATGGATTGGAGCTGCATGATAAAGAGGAAATAGCAGAGGAGATTGCACGGCTACGGAGTGCTGTTAGTGTGTTGACTGAGGCGAAGAAGAGCTCTAAGGGTGCAGCGGTGCAAATTCTTGATGCAATTGGCAAGTTAGAGGCCAATATTAACCGGAACCTTGAAAGAGCTGTCAAGGAGAATGATAGGGTTTATCTCATGAGAATTCCTTCCCCTAGTTCGTTACCCCCCATTCCATCATTTTCTATGGTGAAGCCCATGGCAATGAATGAGGTTCTGGATGCAAGCAAAGAAAAGCTGTTTGCAAGTCTTGTTCCGGACAACAGTGCAAAGGCCCTCTCACGGTATACTGAAATGGTAGACGATGTTATAAGAACACAGGCTGAAAAGTTGCAGCAAGCTAGTGAGCTAACCCGAGTTAGGCTTAAGGAAATGGAGCTGCCGGATTCCATTCTTGCTTTGGAAGGAAATTTTACTCTTCCAACAAGTCTCAAAGAAGATGTGGAAGCTGTGCAGATCAGTGGGGGCCCTGCTGGTTTGGAAGCAGAGTTGCAGCAACTTAAGGACCTAAGGAGGGTGAATCAAGAGTTGCTGGTCCAGACTGAGGAATTGTTGCAGAAGGAAGCAAGAGAAGATTCTCAATTTAGAAGTCAATTTGGCACGAAATGGACCAGGCCCCAGTCAAGCACCTTGACTAAAAACTTGCAGGATAGGCTCAACAGGTTTGCAGGTAACTTGAAGCAGGCTGCTGAAAGTGATGGTAGGATAGAGCGATCAGTTAGAGAACATTCAGCACTCATGTCAATCCTTGATGCCCGTCCGATTGAATCCGCACTTCCAAGCTTGGCAAGGCCTATTATGTCTTTTGATCAAAATGAAGATGCTATTGTGGGGTCTCTCAAGCAAAGTTTGAGGCAACTAGAAACTCTTGGAGCTCAAAGGGCCGGTCTTGAAGATATGCTTAAAGATATGAAAAGAAAGGATGATATATTACCAAAGTTGATGACTTCCACTGGTTCTTATGATGATCTCTTCAAGAAGGAGCTAGCAAAATATGACCATATTTGTGATGAAATAGCTCAAAATATTGAGGCTCAAGAGCAACTGTTGCTACAGATCCAGGCTCAAAATGATGAGTTCTCTGTTATCTTCAATCTTGAAGATTACAAAGCTTCACGTGAAAAAGCCTACAAGCAGATTGAAGCCGCCATAGCAAAATTTCGAGAGATAAAGGACAACATCAATGAAGGGTTAAAATTCTATGTTACCCTGCAGGATGCAATCACAAACGTAAAGCAGCAGAGCAACGACTTTGTAATGACAAGGAACATTCAGTGCAGGGAAATGATTGAAGATGTTCAGAGACAAGTGGCTGGACTGAGTTTCCAGGACAAAAACTCAGGTGCTTCTTTTAACAGCAACTACCCATCAGTTGGAAGCCAAAATCAAAGAGCCAGTCCACAAACAGATCCTCGTCCACAAGCACCTTATTATCAGCCAGTTGAGCAGCCACCAGTTGCTCCCTATGGCCATCATGCACCTTCCCCATATGGTGCTCCTGCACACCATCATCAGCCTCCACCTCCATACCACATTCCACCATCATCAACTGCTCCATACCCACCCCATCAGGTTCACCAGCAGCCACCACCGGGAAACCATGAGTATGGCCAGCCAGCATATCCAGGATGGCGTGGTCCGTACTATAATACACAAGCACAGCAACCTGGCTCTGTGCCACGACCTCCTTATACTATTCCCTCTCCATATCCTCCACCTCACCAAAGTGGCTACTATAAGCAGCAATAG 2610 0.4797 MAASPSSSANIVLAIFEKKTNTVDMYRPLRNYVAYHYSEREAQNVEDDLQTLKQLRYEIERHLDPSLPARRDVLQTYFKSLCLVETRFPISSDPDHVNALTFVWFDAFKPKQKASQQNIHLEKAAVLFNLGAVYSQIGCSYDRNTVDGRRQASHAFIAAAGSFAFLRDNASMKASVGNSTTVDLSVECAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQVGIYYEEALAALNVAPLSQHFEKSWIVHVQLKAALFYAEACYRYGLELHDKEEIAEEIARLRSAVSVLTEAKKSSKGAAVQILDAIGKLEANINRNLERAVKENDRVYLMRIPSPSSLPPIPSFSMVKPMAMNEVLDASKEKLFASLVPDNSAKALSRYTEMVDDVIRTQAEKLQQASELTRVRLKEMELPDSILALEGNFTLPTSLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQELLVQTEELLQKEAREDSQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDGRIERSVREHSALMSILDARPIESALPSLARPIMSFDQNEDAIVGSLKQSLRQLETLGAQRAGLEDMLKDMKRKDDILPKLMTSTGSYDDLFKKELAKYDHICDEIAQNIEAQEQLLLQIQAQNDEFSVIFNLEDYKASREKAYKQIEAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCREMIEDVQRQVAGLSFQDKNSGASFNSNYPSVGSQNQRASPQTDPRPQAPYYQPVEQPPVAPYGHHAPSPYGAPAHHHQPPPPYHIPPSSTAPYPPHQVHQQPPPGNHEYGQPAYPGWRGPYYNTQAQQPGSVPRPPYTIPSPYPPPHQSGYYKQQ 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03726 869 Pfam ALIX V-shaped domain binding to HIV 427 711 IPR025304 GO:0005515
Viun7g03726 869 MobiDBLite consensus disorder prediction 760 778 - -
Viun7g03726 869 CDD V_Alix_like_1 373 709 - -
Viun7g03726 869 MobiDBLite consensus disorder prediction 731 869 - -
Viun7g03726 869 CDD BRO1_Alix_like_1 12 367 - -
Viun7g03726 869 Coils Coil 275 295 - -
Viun7g03726 869 Gene3D alix/aip1 like domains 419 700 - -
Viun7g03726 869 Gene3D alix/aip1 in complex with the ypdl late domain 373 651 - -
Viun7g03726 869 ProSiteProfiles BRO1 domain profile. 11 405 IPR004328 -
Viun7g03726 869 Gene3D alix/aip1 like domains 9 372 IPR038499 -
Viun7g03726 869 SMART BRO1_2 11 395 IPR004328 -
Viun7g03726 869 PANTHER PCD6 INTERACTING PROTEIN-RELATED 13 860 - -
Viun7g03726 869 Coils Coil 653 680 - -
Viun7g03726 869 Coils Coil 574 594 - -
Viun7g03726 869 Coils Coil 35 55 - -
Viun7g03726 869 MobiDBLite consensus disorder prediction 847 861 - -
Viun7g03726 869 Pfam BRO1-like domain 13 390 IPR004328 -
Viun7g03726 869 Coils Coil 623 643 - -
Viun7g03726 869 MobiDBLite consensus disorder prediction 731 759 - -
Viun7g03726 869 Coils Coil 447 474 - -
Viun7g03726 869 MobiDBLite consensus disorder prediction 787 815 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03726 7 37820093 37828241 Viun7g03726 7 37820093 37828241 ECH