Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03687 ATGGTCATGCTGGGTAGCATAAAACGTGCCACATCCCAGTCAGTGTTGGGTTCCATGGCACTTTTTCGATCATCCAAAAGGTTCCTCATCTCCGATCTCCTCCTTCCCCTCACAGAATCTTCTTCGATATCCCTTAATCCTTCGTCAAGTTCAAATTTTCACCACCATTACCCCAAACCCACAATCCAATTTCCCTATGGGTCTCCAAAAAACACCACATTGGCCTTCCACACGGCCCAACCTAGGTCCACCTCCAACGCCGAAGCAATCTGCAGAATCTTATCCAACTCCCGCGACTCCACCGTCGCTGCCTCTCTCGCTGCTGTTGTGGTGAATCCCTCGCCGGAGCTCGTCCTCGAGGTCTTGAACAAACTCAGCAATGCCGGTACCCTTGCGCTTTCGTTCTTCCGTTGGGCCGAGAAGCAAGGCGAGTTCAAACACACCACAGAGACCTTTCACGCATTGATCGAAGCACTGGGTAAGATCAGACAGTTCAAATTGATTTGGACTTTGATCGACGACATGAAGCAACGAAAGTTGCTGACTTCTGACACTTTTGCCCTCGTTGCTCGGCGATACGTGCGAGCACGGAAGGTCAAGGAAGCAACCGAGACATTTGAGAAGATGGAGCGGTACGGTCTGAAGCCGCATGTATCGGATTTCAATAGGTTGATCGATGTGTTGTGTAAATCGAAGTGTGTTGAGAAGGCGCATGAGGTGTTTGATAAAATGAGGCACTTAGGGTTGGACCCCGATATCAAGTCCTACACCATTTTGCTAGAAGGGTGGAGTCAGCTGCAGAACTTGATCAAACTCAATGAATTGTGTAGGGAAATGGAGGATAAAGGTTTTCAGATTGATGTTGTTGCGTATGGAATAATCATCAATGCGTATTGCAAGGCTAAGAAATTTGATGAAACCATTGGGTTGTACCATGAGATGAAAGCTAAGGGTCTGAGGCCCAGTCCCCATGTGTATTGTACTTTGATTAATGGTTTGGGTTCAGATAAGAGATTGAACCAAGCTCTTGAGTTTTTTGAGGCATCTAAGGCTAGTGGCTTTGCACCGGAGGCTCCCACCTACAATGCTGTTGTTGGGGCTTATTGCTGGTCTTTGCGTATGGATGATGCGTATAGGATGGTTGGCGAGATGAAAAAGTGTGGAATTGGTCCAAATTCTCGAACTTTTGATATTATACTTCATCATCTTATAAAGGGTCGTAGGATTGAAGAAGCTTGCTCGGTTTTTCACAGAATGGGTGGCGAGTTTGGGTGTGAGCCGAGTGTGAGCACGTATGAGATCATGGTGAGAATGTTTTGTAATGAACAGAGATTGGATATGGCGATGGCAGTTTGGGATGAGATGAAAGAGAAGGGAATTCTTCCTGGAATGCACATGTTCTCCACGTTGATCTGTTCCTTGTGCCATGAAAGTAAGTTGAATGATGCGTGTAAGTACTTTCAAGAAATGTTAGATGTGGGTATTCGGCCTCCTGCCAAAATGTTCAGCACCTTGAAGGAAGCTCTGGTTGATGCGAGGATGGAGCATATTGCCATGCATTTTGCTTTGAAAATTGATAAACTCAGGAAGTCTCCATTGGTTGCTTGA 1608 0.4621 MVMLGSIKRATSQSVLGSMALFRSSKRFLISDLLLPLTESSSISLNPSSSSNFHHHYPKPTIQFPYGSPKNTTLAFHTAQPRSTSNAEAICRILSNSRDSTVAASLAAVVVNPSPELVLEVLNKLSNAGTLALSFFRWAEKQGEFKHTTETFHALIEALGKIRQFKLIWTLIDDMKQRKLLTSDTFALVARRYVRARKVKEATETFEKMERYGLKPHVSDFNRLIDVLCKSKCVEKAHEVFDKMRHLGLDPDIKSYTILLEGWSQLQNLIKLNELCREMEDKGFQIDVVAYGIIINAYCKAKKFDETIGLYHEMKAKGLRPSPHVYCTLINGLGSDKRLNQALEFFEASKASGFAPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIILHHLIKGRRIEEACSVFHRMGGEFGCEPSVSTYEIMVRMFCNEQRLDMAMAVWDEMKEKGILPGMHMFSTLICSLCHESKLNDACKYFQEMLDVGIRPPAKMFSTLKEALVDARMEHIAMHFALKIDKLRKSPLVA 535
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03687 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 322 356 IPR002885 -
Viun7g03687 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 463 497 IPR002885 -
Viun7g03687 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 428 462 IPR002885 -
Viun7g03687 535 Pfam PPR repeat 466 495 IPR002885 -
Viun7g03687 535 Pfam PPR repeat 191 214 IPR002885 -
Viun7g03687 535 Pfam PPR repeat family 360 404 IPR002885 -
Viun7g03687 535 Pfam PPR repeat family 220 262 IPR002885 -
Viun7g03687 535 Pfam PPR repeat family 287 333 IPR002885 -
Viun7g03687 535 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 48 402 - -
Viun7g03687 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 182 216 IPR002885 -
Viun7g03687 535 NCBIfam pentatricopeptide repeat 185 216 IPR002885 -
Viun7g03687 535 NCBIfam pentatricopeptide repeat 221 253 IPR002885 -
Viun7g03687 535 NCBIfam pentatricopeptide repeat 395 429 IPR002885 -
Viun7g03687 535 NCBIfam pentatricopeptide repeat 289 322 IPR002885 -
Viun7g03687 535 NCBIfam pentatricopeptide repeat 431 462 IPR002885 -
Viun7g03687 535 NCBIfam pentatricopeptide repeat 466 497 IPR002885 -
Viun7g03687 535 NCBIfam pentatricopeptide repeat 360 392 IPR002885 -
Viun7g03687 535 NCBIfam pentatricopeptide repeat 325 356 IPR002885 -
Viun7g03687 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 357 391 IPR002885 -
Viun7g03687 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 217 251 IPR002885 -
Viun7g03687 535 Gene3D Tetratricopeptide repeat domain 267 399 IPR011990 GO:0005515
Viun7g03687 535 Pfam PPR repeat 424 456 IPR002885 -
Viun7g03687 535 Gene3D Tetratricopeptide repeat domain 400 522 IPR011990 GO:0005515
Viun7g03687 535 Gene3D Tetratricopeptide repeat domain 89 217 IPR011990 GO:0005515
Viun7g03687 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 287 321 IPR002885 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun7g03687 Viun-Chr7 37675753 37677583 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03687 151 513 Glycosyltransferase AT1G05670 26.648 7.84e-46 169
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03687 7 37675753 37677583 Viun7g03687 7 37675753 37677583 ECH