Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03668 ATGGCAATCCACAACCACAATCACCAACTACAACATAACGAGAATGTCTCATCTGTTCTTGATGCCCTTTACTGTGATGAAGCAAAGTGGGAAGAGGAAGAAGAAGATGAAGAGAGTGATGTCACAAACAGTGAGGCACGTGGAATGCACGACACTCTTTTCCCTCTGCTCTTGTTGGAGCAAGACTTCTTCTGGGAAGACCAGGAACTAAACACTCTCTTTTCCAAAGAGAAGCTTCAGCATCAACAAGTTTACGGCTATAACAATCTCAACACTGATGCTAATAATAACAATAATGATGCTTGTGACAGTACTAAGAATAATGTGCATTTGGACCCTTCTTTCTCTCAGCCTCGTCGTGAGGCGGTGGAATGGATGCTCAAAGTCAATGCTCACTATGGATTCTCTGCTCTCACTGCAACACTGGCCGTTACTTATCTGGATAGGTTCCTTCTAAGCTTCCATTTTCAAAGGGAGAAGCCTTGGATGATCCAGCTCGTGGCTGTCACTTGCATCTCTTTGGCTGCAAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTAGACCTTCAGGTGCAGGACACAAAGTATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTGCTGGTGCTGTCCACCCTCAAATGGAAGATGCATCCCGTGACCCCACTTTCCTTTCTAGATCACATCATAAGAAGGCTTGGATTGAGAACTCATCTTCACTGGGAGTTTCTCAGGCGCTGCGAGCATCTCCTTCTGTCTGTGCTTTTGGATTCGAGATTTGTTGGGTGCCTTCCTTCTGTTCTGGCCACTGCAACAATGCTGCATGTAATAGACCAGATTGAACACAGTGGTGGGATGGAATACAAAAATCAGCTTCTGAGTGTTCTCAAAATTAGCAAGGAGAAAGTAGATGAGTGTTATAATGCTATTCTCCAACGCTCAAATGCCAATATTTATGGTCATAACAACAACATTTACAAGCGCAAGTATGAGGAAATTCCAGACAGCCCAAGTGGCGTAATTGATGCTGCATTTGGTTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCACTGTATTCATCACCAGAGCCTCTGTTCAAGAAGAGCAGAACCCAAGGACAACAAATGAAATTGTCACCACTTAATCGGGTCATTGTCGGAATTGTTGGCACCTCTCCTTGA 1191 0.445 MAIHNHNHQLQHNENVSSVLDALYCDEAKWEEEEEDEESDVTNSEARGMHDTLFPLLLLEQDFFWEDQELNTLFSKEKLQHQQVYGYNNLNTDANNNNNDACDSTKNNVHLDPSFSQPRREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLRTHLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHVIDQIEHSGGMEYKNQLLSVLKISKEKVDECYNAILQRSNANIYGHNNNIYKRKYEEIPDSPSGVIDAAFGSDGSNDSWAVGSSLYSSPEPLFKKSRTQGQQMKLSPLNRVIVGIVGTSP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03668 396 Gene3D - 117 219 - -
Viun7g03668 396 Pfam Cyclin, N-terminal domain 117 218 IPR006671 -
Viun7g03668 396 CDD CYCLIN_AtCycD-like_rpt1 119 216 - -
Viun7g03668 396 ProSitePatterns Cyclins signature. 119 150 IPR006671 -
Viun7g03668 396 SUPERFAMILY Cyclin-like 116 219 IPR036915 -
Viun7g03668 396 SMART cyclin_7 124 212 IPR013763 -
Viun7g03668 396 FunFam CYCLIN D32 220 309 - -
Viun7g03668 396 PANTHER CYCLINS 73 322 IPR039361 -
Viun7g03668 396 Pfam Cyclin, C-terminal domain 221 331 IPR004367 -
Viun7g03668 396 FunFam D3-type cyclin 112 219 - -
Viun7g03668 396 SUPERFAMILY Cyclin-like 222 332 IPR036915 -
Viun7g03668 396 CDD CYCLIN_AtCycD-like_rpt2 221 311 - -
Viun7g03668 396 Gene3D - 220 311 - -
Viun7g03668 396 SMART Cyclin_C_2 221 350 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03668 Viun-Chr7 37599806 37601988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03668 1 313 Core Cell Cycle Gene Families AT4G34160 53.674 5.74e-111 328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03668 7 37599806 37601988 Viun7g03668 7 37599806 37601988 ECH
Viun9g03435 9 40592304 40594291 Viun7g03668 7 37599806 37601988 ECH
Viun8g00377 8 2484258 2486119 Viun7g03668 7 37599806 37601988 ECH
Viun2g02147 2 29486686 29488503 Viun7g03668 7 37599806 37601988 PCT