Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02810 ATGTATTTCTTCACTGAGAAAATGCAGCGTTTGAAGATGGGGTTTCCTGACTACATCCAGGCATTGGAAGAAGAACGCCGTAAGATTCAGGTCTTCTGCAAAGAGCTTCCTCTTTCCTTGGAGCTAGTTACTCAAGCCATTGAAGCTTGCAGACAACAATTGTCTGGCACCACTAGCGAGTATAATTTGAACGGTCAATCGGAGTGTTCGGAGCGGACAACATCATCAGAGGGACCAGTCTTGGAGGAGTTCATTCCAATCAAGAAAAGGGCATCATCATCCCCTTGTTGCGATGAAGATGACGAAGACAACGAACAGCATTCTCTCAGGCAAAGGGTTTTAAATGAGAATAATAAGAACAGTGATAAGAGGAAATCCGACTGGCTCAGATCTGTTCAGCTGTGGAATCCAGATCCCCCAGCTGAGGAGGATGCGACTAGGAAAGTTCCTGGGATAGAATTGAAGAGAAGTGGATGTGGTGGAGGTGCTTTCCAGCCATTCCACAAGGAAGAAAAAGCTGCAAAGGCAACTGAATCGTCGTGTAAAGCACCCTCTTTAACCCTGGTAGCTGCTGCGAGTTCTAGCGCCGGAGAACTCACCCCAGAAAAAAATCAGAGTGAGGGACAGAGAAAGCAGCGCAGGTGCTGGTCTCAGGACTTGCACAAGCGCTTCTTGCATGCCCTTCAGCAGCTTGGGGGTGCAGATTCTGCCACACCAAAACAAATCAGAGAGCTAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTACAGAAATACCGTTTGCACACGAGAAGGCCAAGTCCCTTGGTTCACAACAGTTCCAGTCAACAAGCAGCGCCTTTTGTCCTTGTTGGGAACATTTTTGTTCAGTCACCAGAATATGCAGCTGTAGCTACCTCAACAGCATCAAGAGAAGTGAACACAGTTCCAGCACCTGCTGGGGTTTATGCACCAGTGGCCACACACCCTACGCCTGTTTCACAACCATCAGCTGATTCAATTAAGAAGCCACAGTTTAAGAAATTTAAGCATTCTGAGCATTCAAATTCAGATGAAAGGGCTCATCACAGTGAAGGAGCTGTTCATTCAAATTCCCCTACCTCATCCTCCTCTACACACACCTCTGCTTCCCCTGGTTATTAA 1155 0.4675 MYFFTEKMQRLKMGFPDYIQALEEERRKIQVFCKELPLSLELVTQAIEACRQQLSGTTSEYNLNGQSECSERTTSSEGPVLEEFIPIKKRASSSPCCDEDDEDNEQHSLRQRVLNENNKNSDKRKSDWLRSVQLWNPDPPAEEDATRKVPGIELKRSGCGGGAFQPFHKEEKAAKATESSCKAPSLTLVAAASSSAGELTPEKNQSEGQRKQRRCWSQDLHKRFLHALQQLGGADSATPKQIRELMNVDGLTNDEVKSHLQKYRLHTRRPSPLVHNSSSQQAAPFVLVGNIFVQSPEYAAVATSTASREVNTVPAPAGVYAPVATHPTPVSQPSADSIKKPQFKKFKHSEHSNSDERAHHSEGAVHSNSPTSSSSTHTSASPGY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02810 384 NCBIfam myb-like DNA-binding domain, SHAQKYF class 211 266 IPR006447 GO:0003677
Viun7g02810 384 Gene3D - 210 268 - -
Viun7g02810 384 Pfam Myb-like DNA-binding domain 213 264 IPR001005 -
Viun7g02810 384 SUPERFAMILY Homeodomain-like 209 269 IPR009057 -
Viun7g02810 384 FunFam Myb family transcription factor 210 268 - -
Viun7g02810 384 MobiDBLite consensus disorder prediction 91 125 - -
Viun7g02810 384 MobiDBLite consensus disorder prediction 319 384 - -
Viun7g02810 384 MobiDBLite consensus disorder prediction 93 125 - -
Viun7g02810 384 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 342 IPR044787 GO:0003700|GO:0006355
Viun7g02810 384 MobiDBLite consensus disorder prediction 340 363 - -
Viun7g02810 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 268 IPR017930 -
Viun7g02810 384 MobiDBLite consensus disorder prediction 364 384 - -
Viun7g02810 384 MobiDBLite consensus disorder prediction 192 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02810 Viun-Chr7 31417761 31420436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02810 4 329 G2-like Transcription Factor Family AT1G68670 46.839 1.75e-80 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun7g02810 Myb_DNA-binding 3e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02810 7 31417761 31420436 Viun7g02810 7 31417761 31420436 ECH