Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02372 ATGGACACAGCTCAGTGCCCTCAGATGGTGGTGAAACCAATGGAAGATATAGTAGTCACAAATACATGTCCAAAGGTTGCAGGAGGAGCTGTGGAAAGAAAACCAAGACCACAGAAAGAACAAGCTCTTAACTGTCCGAGGTGTCATTCGATTAACACCAAGTTCTGCTACTACAACAACTATAGCCTCACGCAGCCTCGCTATTTCTGCAAAACTTGTAGAAGGTATTGGACAGAAGGTGGATCCCTCAGAAACATCCCTGTCGGAGGTGGCTCCAGGAAGAACAAGAGATCTTCTACTTTTTCTTCCACACCTCAGAACAATTCGCCAGATAATAATAAGAACCTTCCTGATCTGGTTGTAATCACACCACACTCTCAAAACCCTAAGAATAACATTCATCAAGGCCAAGATCTCAATCTGGGTTTCCCAGCCACAACCTCAGATTTTAGAAACGTGTCTGAATTGGTTCAGCAAAACAACAACAATAGTACCAACAACAACAACAACAACAACATGTCTGCTTCTTCTTCTTCTTCAACCACCTCTACCACCACAGCTACAACAACCTCTCACCTTTCTGCATTGGAGCTTCTCACTGGGATCACTTCAACTTCCACGGGGTTGAATTCTTTCATGCCTGTTCCCGTTCCAGCTGATCCAAATTCTGCATACACATGTGGGTTTCCTCTGCAAGATTTCAAGCCAACCTTGAATTTCTCTTTAGATCACGGGTACGCGAGCCTGCATAATGTTCAAAGTGGGAGGCTCTTGTTTCCATTCGAGGACTTGAAACAGGTTTCCACTACTACCACAATGGATCAGAAGCAGCAAGGAGATTCAACCGGGTATTGGACTGGGATGTTTGGCGGAGGATCATGGTAA 885 0.4475 MDTAQCPQMVVKPMEDIVVTNTCPKVAGGAVERKPRPQKEQALNCPRCHSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSTFSSTPQNNSPDNNKNLPDLVVITPHSQNPKNNIHQGQDLNLGFPATTSDFRNVSELVQQNNNNSTNNNNNNNMSASSSSSTTSTTTATTTSHLSALELLTGITSTSTGLNSFMPVPVPADPNSAYTCGFPLQDFKPTLNFSLDHGYASLHNVQSGRLLFPFEDLKQVSTTTTMDQKQQGDSTGYWTGMFGGGSW 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02372 294 MobiDBLite consensus disorder prediction 84 145 - -
Viun7g02372 294 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Viun7g02372 294 MobiDBLite consensus disorder prediction 159 188 - -
Viun7g02372 294 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 32 182 IPR045174 GO:0003700|GO:0006355
Viun7g02372 294 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Viun7g02372 294 MobiDBLite consensus disorder prediction 92 145 - -
Viun7g02372 294 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02372 Viun-Chr7 27717601 27719475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02372 1 294 C2C2-Dof Transcription Factor Family AT4G24060 44.663 6.45e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Viun7g02372 zf-Dof 3.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02372 - - pvu:PHAVU_001G080800g 455.677