Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02370 ATGGACACAGCTCAGTGCCCTCAGGAGATGGTGGTGAAACCAATGGAAGATATAGTAGTCACAAATACATGTCCAAAGGTTGCAGGAGGAGCTGTGGAAAGAAAACCAAGACCACAGAAAGAACAAGCTCTTAACTGTCCGAGGTGTCATTCGATTAACACCAAGTTCTGCTACTACAACAACTATAGCCTCACGCAGCCTCGCTATTTCTGCAAAACTTGTAGAAGGTATTGGACAGAAGGTGGATCCCTCAGAAACATCCCTGTCGGAGGTGGCTCCAGGAAGAACAAGAGATCTTCTACTTTTTCTTCCACACCTCAGAACAATTCGCCAGATAATAATAAGAACCTTCCTGATCTGGTTGTAATCACACCACACTCTCAAAACCCTAAGAATAACATTCATCAAGGCCAAGATCTCAATCTGGGTTTCCCAGCCACAACCTCAGATTTTAGAAACGTGTCTGAATTGGTTCAGCAAAACAACAACAATAGTACCAACAACAACAACAACAACAACATGTCTGCTTCTTCTTCTTCTTCAACCACCTCTACCACCACAGCTACAACAACCTCTCACCTTTCTGCATTGGAGCTTCTCACTGGGATCACTTCAACTTCCACGGGGTTGAATTCTTTCATGCCTGTTCCCGTTCCAGCTGATCCAAATTCTGCATACACATGTGGGTTTCCTCTGCAAGATTTCAAGCCAACCTTGAATTTCTCTTTAGATCACGGGTACGCGAGCCTGCATAATGTTCAAAGTGGGAGGCTCTTGTTTCCATTCGAGGACTTGAAACAGGTTTCCACTACTACCACAATGGATCAGAAGCAGCAAGGAGATTCAACCGGGTATTGGACTGGGATGTTTGGCGGAGGATCATGA 885 0.4486 MDTAQCPQEMVVKPMEDIVVTNTCPKVAGGAVERKPRPQKEQALNCPRCHSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSTFSSTPQNNSPDNNKNLPDLVVITPHSQNPKNNIHQGQDLNLGFPATTSDFRNVSELVQQNNNNSTNNNNNNNMSASSSSSTTSTTTATTTSHLSALELLTGITSTSTGLNSFMPVPVPADPNSAYTCGFPLQDFKPTLNFSLDHGYASLHNVQSGRLLFPFEDLKQVSTTTTMDQKQQGDSTGYWTGMFGGGS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02370 294 MobiDBLite consensus disorder prediction 93 146 - -
Viun7g02370 294 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Viun7g02370 294 Pfam Dof domain, zinc finger 42 98 IPR003851 GO:0003677|GO:0006355
Viun7g02370 294 MobiDBLite consensus disorder prediction 85 146 - -
Viun7g02370 294 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 33 183 IPR045174 GO:0003700|GO:0006355
Viun7g02370 294 MobiDBLite consensus disorder prediction 160 189 - -
Viun7g02370 294 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02370 Viun-Chr7 27717601 27719518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02370 1 294 C2C2-Dof Transcription Factor Family AT4G24060 44.789 4.78e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Viun7g02370 zf-Dof 3.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02370 - - pvu:PHAVU_001G080800g 462.225