Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00399 ATGAGAGAAAATTTCCATTGGTTGTCGGTTGATCAACTACTGAATACCAGAAGAAAGGTGGTAAACTTGTGTAAGCGAATTCCATTGTTTGAGAGGAAATCGTTCTCAAGAATCATGTCCCTTTTAATGTTTTTTTCGGGCATAAGGAACGCTCTGGCAGATGATGAATTAGGCCTGGAAATACTGCATATTTCACTCCCTACAACTCTGGCTTTGGCAGCAGATCCTATTGCTTCTCTAATTGATACTGCATTCATCGGCCATATAGGTCCTGTGGAGCTTGCTGCTGTGGGAGTCTCCATTGCTATTTTCAATCAAATCTCAAAAATTACAATAATTCCACTCGTCAGTGTTACAACCTCTTTGGTTGCAGAGGAAGATGCTGCTGAACAGAGACATCAGTCAGAAAAAGAAATTCTGCTAGAGGAATCTGTTGTAAATGAGAGTGTAAAGGTGGATATAGAAGGCCAAGAAGACAAACCTGGCAATACTTTTTCAAGAAATGTTGATAAAAGGGATGCACTTGGCCGTGGCAAAGCCTATATTCCATCAGCATCCTCAGGAATAGTTATTGGCGGTGTTCTTGGGGTCCTACAAACTCTCTTTCTCATTTTTACAGCTAAACCGATGTTGAACTACATGGGCGTTGATTCTAATTCTCCTATGTTCAAACCAGCACAGCAATACTTGACACTGAGATCATTCGGTGCACCAGCAGTTATTATTTCTATGGCAATTCAAGGAGTTTTTCGTGGAATCAGAGATACAAAAACTCCTTTGTATGCTACAGTAATGGGAGATGCAACAAATATCATTTTAGATCCATTGCTCATGTTCGTAGTGCGGTTGGGAGTCAGTGGAGCAGCCATTGCCCACATTTTCTCCCAGTACTTGATATCCATATTGCTATTGTGGAGTTTGATGAAGCAAGTTGTTCTTCTGCCTCCGACAATGAAAGACTTTCAATTTGGGAAGATTCTGAAAAATGGGTTTCTGTTGTTGGTTAAAGTTGGAGCTGCGACTTTCTGTGTGACCTTGTCTGCATCCCTAGCAGCAAGGAAAGGATCAACAACTATGGCTGCATTTCAGATCTGCTTACAAATTTGGATGGCAACATCTTTGCTTGCTGATGGATTGGCTGTTGCTGGACAAGCTATTATTGCAAGTGAATTTGCTAAAAGGGATTACAAAAAGGTTATCGAATCTGCCTCACGTGTGCTGCAGCTTGGTTTGATTCTTGGGCTGGTGCTCTCAGTTCTTCTTATCAGTCTATTGCCCTTTGGTTCTAAGTTATTTACAAATGACAGAAGTGTTCTGCAACTTATCAGTATTGGCATTCCATATGTTGCTGCCACTCAACCTATCAATGCTTTGGCTTTTGTTTTTGATGGAATCAACTATGGGGCATCAGATTTCACATACTCCGCTTACTCAATGATTATGGTGGCAGTGGTGAGCATATGTAGTTTATATGTGCTGTCCTCAAGCTTTGGCTTCACTGGTATCTGGATTGCGTTGTCTATTTACATGGCTCTAAGGATATTTGCAGGATTTTGGAGGATTGGTACTGCATCAGGACCTTGGAGCTTCCTTACTGAAAACTCTAATTTGTGCCAGTAG 1620 0.4123 MRENFHWLSVDQLLNTRRKVVNLCKRIPLFERKSFSRIMSLLMFFSGIRNALADDELGLEILHISLPTTLALAADPIASLIDTAFIGHIGPVELAAVGVSIAIFNQISKITIIPLVSVTTSLVAEEDAAEQRHQSEKEILLEESVVNESVKVDIEGQEDKPGNTFSRNVDKRDALGRGKAYIPSASSGIVIGGVLGVLQTLFLIFTAKPMLNYMGVDSNSPMFKPAQQYLTLRSFGAPAVIISMAIQGVFRGIRDTKTPLYATVMGDATNIILDPLLMFVVRLGVSGAAIAHIFSQYLISILLLWSLMKQVVLLPPTMKDFQFGKILKNGFLLLVKVGAATFCVTLSASLAARKGSTTMAAFQICLQIWMATSLLADGLAVAGQAIIASEFAKRDYKKVIESASRVLQLGLILGLVLSVLLISLLPFGSKLFTNDRSVLQLISIGIPYVAATQPINALAFVFDGINYGASDFTYSAYSMIMVAVVSICSLYVLSSSFGFTGIWIALSIYMALRIFAGFWRIGTASGPWSFLTENSNLCQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00399 539 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 43 533 IPR044644 -
Viun7g00399 539 NCBIfam MATE family efflux transporter 67 503 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun7g00399 539 Pfam MatE 342 491 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun7g00399 539 Pfam MatE 185 276 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun7g00399 539 CDD MATE_DinF_like 60 523 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00399 Viun-Chr7 2862512 2867169 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00399 7 2862512 2867169 Viun7g00399 7 2862512 2867169 ECH
Viun7g00399 7 2862512 2867169 Viun5g03600 5 45444242 45448915 ECH