Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02766 ATGGAGCAGGGAGGTGGAGAAGGAGGTGACATGAACAAACTACCTCAGGATTCAAGAATGAAGGAGATGCAACAAGGGGATGCACAGCCTCAGGTTCAGGCCCCTCAACAACCCCAAAAGTGTCCTCGATGCGACTCTCTCAACACCAAATTTTGCTATTACAACAACTATAGCTTGTCACAGCCTCGTTACTTCTGCAAAACATGCAGGCGTTACTGGACTCAAGGTGGAACCTTAAGGAACGTTCCCGTCGGTGGTGGTTGCCGCAAGGGGAAGCGCGCCAAGAGTTCCAATCCATCATCATCATCGGAGAATTCCTCTTCTCGGTCGCTGCCGCAACAACAACAATCGCAAGACGTGGTGGTTCAAACCCAACCACCACCTTTAACAACGGTGCCGAGGGCTAAAGACCCTTCTTCAGTTTTGGCTTCACCTTTCTACCAAAGTGGTGGGTACTTGTCTTCTCTGGCTGCTATTCATTCGCTCAATCCATCATCACACCCTTTTGATCAGTCTCTGAATAGTGACGCCTTGCGTTCTTCCAATTTGGGCCTTCTATCTGCTTTCAACGTTCAGCGGCCAACTGGGTCAATTGGGACAATTCGTCCGCCGCAATTGTATCAAATGGGCAGTGGTCAGAGGGAGGTGGTGTCTCTCTATGATCAAGGTTTGGTTAATCCATCATCATCAAGCATGGCTAATACCAATAGCAGTAACGTTTCTCACCATGATTGGCCTCAGAGTTTCATGAGTAACAATACTAATGCCAGCAATAGAGCCTCTGATGCCTCTTTGTGGAGCACCATCAGTACCACTATTGGAGGCAACTCCGAGAGGACTAGTGCTGCTGCTGGTACTGTTTCAGGGTCGTCCTTGGTTCAAAATCAATGGCCTGATATTCCAGGGTATGGCCCTCCACCGTGA 924 0.4913 MEQGGGEGGDMNKLPQDSRMKEMQQGDAQPQVQAPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKSSNPSSSSENSSSRSLPQQQQSQDVVVQTQPPPLTTVPRAKDPSSVLASPFYQSGGYLSSLAAIHSLNPSSHPFDQSLNSDALRSSNLGLLSAFNVQRPTGSIGTIRPPQLYQMGSGQREVVSLYDQGLVNPSSSSMANTNSSNVSHHDWPQSFMSNNTNASNRASDASLWSTISTTIGGNSERTSAAAGTVSGSSLVQNQWPDIPGYGPPP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02766 307 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Viun6g02766 307 MobiDBLite consensus disorder prediction 18 40 - -
Viun6g02766 307 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Viun6g02766 307 MobiDBLite consensus disorder prediction 80 140 - -
Viun6g02766 307 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 254 IPR045174 GO:0003700|GO:0006355
Viun6g02766 307 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Viun6g02766 307 MobiDBLite consensus disorder prediction 94 130 - -
Viun6g02766 307 MobiDBLite consensus disorder prediction 277 297 - -
Viun6g02766 307 MobiDBLite consensus disorder prediction 277 307 - -
Viun6g02766 307 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02766 Viun-Chr6 31507814 31509903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02766 12 97 C2C2-Dof Transcription Factor Family AT5G60200 65.116 1.88e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Viun6g02766 zf-Dof 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02766 - - gmx:100817065 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02766 6 31507814 31509903 Viun6g02766 6 31507814 31509903 ECH