Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun6g01815 | ATGGAAGAAATAGGTCCAAGACCATCATCGTTAGAGAAGAAAGCAAAACCGCAAGAGCAATTGAATTGTCCAAGGTGCAGTTCAACGAACACAAAGTTCTGCTATTACAACAATTACAGCCTCACACAGCCAAGATACTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGTGGTTCTCTCAGAAACGTCCCCGTTGGAGGTGGCTCCAGGAAGAACAAGAAGGCCACCTCATCAAAGGTTCCTGATTTGAATCCACCAAGCCTCTCTTCAGTCTCCGCTATTTCTTCCCAAAACCCTAAAATGCAAGGAGTCCATGACCTTAATTTGGCTTTTCCTATGGACAAGTATCATGGCATGTCCCAATATGTTGAGATGCCAAAACTTGAAATTGGTGGTGACAATACTAGTCACCACCATAGCCCTTCTTCTGCTCCAACTTCTCTTTCACCAACATATGGCATGTTGCCTAGGGGTTTGAATCCTTATGCTCCTAATTCCTTCATGCCAAGCTCAGATTCACTTTACACACCGATCTACCCCATGCAAGAAATTAAACCAAACCTTAGCTTTTCGGTTGATGGGTTTGGAAATAGATCACACGGCGGGGTTCAAGAGAACGGTGGCGGCGGCAGGCTTTTGTTCCCTTTCGGAGACATCAAGCACCTTTCTGCAGGTGTTGAAGTTGAACACAATAAAGAACAAGGAAATAATCCAACTGGATACTGGTCTGGAATCATCGGAGAAGGTTCATCATGGTAA | 762 | 0.4449 | MEEIGPRPSSLEKKAKPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKATSSKVPDLNPPSLSSVSAISSQNPKMQGVHDLNLAFPMDKYHGMSQYVEMPKLEIGGDNTSHHHSPSSAPTSLSPTYGMLPRGLNPYAPNSFMPSSDSLYTPIYPMQEIKPNLSFSVDGFGNRSHGGVQENGGGGRLLFPFGDIKHLSAGVEVEHNKEQGNNPTGYWSGIIGEGSSW | 253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun6g01815 | 253 | MobiDBLite | consensus disorder prediction | 130 | 149 | - | - | |
Viun6g01815 | 253 | ProSiteProfiles | Zinc finger Dof-type profile. | 21 | 75 | IPR003851 | GO:0003677|GO:0006355 | |
Viun6g01815 | 253 | MobiDBLite | consensus disorder prediction | 72 | 95 | - | - | |
Viun6g01815 | 253 | MobiDBLite | consensus disorder prediction | 232 | 253 | - | - | |
Viun6g01815 | 253 | ProSitePatterns | Zinc finger Dof-type signature. | 23 | 59 | IPR003851 | GO:0003677|GO:0006355 | |
Viun6g01815 | 253 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Viun6g01815 | 253 | Pfam | Dof domain, zinc finger | 19 | 75 | IPR003851 | GO:0003677|GO:0006355 | |
Viun6g01815 | 253 | MobiDBLite | consensus disorder prediction | 62 | 95 | - | - | |
Viun6g01815 | 253 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 12 | 116 | IPR045174 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun6g01815 | Viun-Chr6 | 25348168 | 25350019 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun6g01815 | 13 | 253 | C2C2-Dof Transcription Factor Family | AT3G61850 | 47.426 | 7.36e-65 | 202 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Viun6g01815 | zf-Dof | 3.9e-33 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun6g01815 | - | - | gmx:100775598 | 382.489 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun6g01815 | 6 | 25348168 | 25350019 | Viun10g02177 | 10 | 36629210 | 36631329 | PCT |