Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00862 ATGTCTTTCGATGATGTTAAGGCTGCTGCTAGTGAGTTCGGTAGGGGATTTAATCACAGTTACTACCACGCGTTGCACATAGCAATACTAAAAGGAGATTGGCAATCTACAAAGGCTTTTCTTGACAATGATCCAAGTGCATGGAGTGCAAAGATCACAATACTTGGTAGGACTGTACTGCATGTTGCAGCAGTAGGAGGACAGTGGCAAATTGTTGAGAAGTTGGTGCAACATGTTCCTGCAAAAGTGCTTGAAGAGTTGGACTTGATGGGTTGTACTTGTTTGCACTATGTTGCAATGGGGGAAAGCAGAAGTGCTGCCAAGGCATTGGTCACTAAAAATCCTTCTCTCACACAATTCACTGACTTTAAAGGATTCACACCACTTATCTACAGTATTACCTCTGCTAAATGCAAAGAAATGGTATGGTACTTTGTTTTGAATACAACAGATGAGAGACCTGGTTGTCCTTTCTCTGGTCCTTCTGCTGCTCAACTTGTTGCTTTGCTTACTGCTGCAGGATTTCATGATGTCACTATATATCTTCTCCAGCGCTACCCAGATTTGGCTACTCTCTCAGATTCAAAGGGAAGCATTATACTTAATGTTTTGTCAAAATTGCCCTCGGACTTCCAAAGTGGAAATAAACTTGGGTTTTGGAAAAGATGCATTTACCACTGTATGCCAGATGAACTTGATTTTTTACCACCAAGTCATCTGAGAGGAAACTTGAAAGATTCATTTGGGAATTCAAGCCATCATCAATCTTATTTTGGAAGTACAATATGGGATGGAATTCAGAGTATTGTTCCTGGCATAAAGCTAGTCAGAGAGGCAAAGTTGAGACATGCATGTGCTGCGAGATTGGTGGAACTTGTTTGCACACAGGTTTCAAATTTGAATGACACCGAATTCTGGCAGTCTTTTGTGAGTGCAGACATTGTTTTCAATGCCTCATCATCTGGCATAGTTGAAATTTTAAGGATCTGTTTCCAGTTTTTTCCTGATTTGGTTTGGACTCACTTGCCAAATGAAGGATATGTAGCTCAAACTGCAATCAAGTATCGGCAAGAGAAGGTTTTTAGTCTTCTATGCAATATGCCTATAGTTTGCAAGTTTTTAATCCTGGCATTAGATGAATCACAAAACACCACATCACATCTAGCAGCAAGGTTTGCTTCTCCTCAACAGGCATCAATTTCTGGTGCAGCCTTTCAAATGCAGAAGGAGTTGCAGTGGTTTAAGAATGTGGAGAAATGGGATCACCCTCTTCATAAAGAAGTTAAAAACAAAGATGGTAAAACTCCTTGGCAATTGTTCAGGGAAGAGCATAAGCCCTTGCTTGAAGAAGCAAAGGTTTGGATGAAGGATACATCAAACTCTTGTATGTTGGTGGCAACTCTTATTGCCACAATTGTCTTTGCTGCTTCTATAACTGTACCTGGAGGAAACAACCAAGACAAAGGGTTTCCATTATTCTTGTCAGATAACACATTCATGGTGTTCGTTGTGTCAGATACACTAGCTTTGTTTTCCTCCATGGTTTCCCTTTTGATGTTTTTATCAATTCTAACTGCACATTATGCAGAAGAAGATTTTCTCAAGAGATTACCTGAGAGAATAATATTGGGTCTGGCTTCTTTGTTCTTTTCCATAGTAACAACAATGATAGCATTTGGTGCAGCCCTTGATTTGTTGCTAAGGGAGAGAGTGAAATGGGTGTCAATCCCAATTGCTCTTCTGGCATGTGTCCCAGTTGCTCTATTTGCAGGGCTTCAACTTCCCTTGTTCATACAAATGATCATATCAACTTATGGTTCTTCTATATATCATCGTCAAAGTCTTTGGTAA 1851 0.4009 MSFDDVKAAASEFGRGFNHSYYHALHIAILKGDWQSTKAFLDNDPSAWSAKITILGRTVLHVAAVGGQWQIVEKLVQHVPAKVLEELDLMGCTCLHYVAMGESRSAAKALVTKNPSLTQFTDFKGFTPLIYSITSAKCKEMVWYFVLNTTDERPGCPFSGPSAAQLVALLTAAGFHDVTIYLLQRYPDLATLSDSKGSIILNVLSKLPSDFQSGNKLGFWKRCIYHCMPDELDFLPPSHLRGNLKDSFGNSSHHQSYFGSTIWDGIQSIVPGIKLVREAKLRHACAARLVELVCTQVSNLNDTEFWQSFVSADIVFNASSSGIVEILRICFQFFPDLVWTHLPNEGYVAQTAIKYRQEKVFSLLCNMPIVCKFLILALDESQNTTSHLAARFASPQQASISGAAFQMQKELQWFKNVEKWDHPLHKEVKNKDGKTPWQLFREEHKPLLEEAKVWMKDTSNSCMLVATLIATIVFAASITVPGGNNQDKGFPLFLSDNTFMVFVVSDTLALFSSMVSLLMFLSILTAHYAEEDFLKRLPERIILGLASLFFSIVTTMIAFGAALDLLLRERVKWVSIPIALLACVPVALFAGLQLPLFIQMIISTYGSSIYHRQSLW 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00862 616 PANTHER CASKIN 55 606 - -
Viun6g00862 616 SMART ANK_2a 20 54 IPR002110 GO:0005515
Viun6g00862 616 SMART ANK_2a 90 119 IPR002110 GO:0005515
Viun6g00862 616 SMART ANK_2a 55 85 IPR002110 GO:0005515
Viun6g00862 616 SUPERFAMILY Ankyrin repeat 24 254 IPR036770 -
Viun6g00862 616 Pfam Domain of unknown function 454 563 IPR026961 -
Viun6g00862 616 Gene3D - 8 207 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00862 Viun-Chr6 18409588 18414275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00862 410 591 Miscellaneous Gene Families AT3G12360 27.174 1.61e-09 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00862 6 18409588 18414275 Viun6g00862 6 18409588 18414275 ECH