Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04116 ATGGATAAAGTAGGGCGTGGTTTCAAGAGCTTCAGAACATTATTGGTTGTGGCTTCTATAACCCTCCCTATTTTAATCACATTTACTCTCATACACCAGAACTCAGTTTTCGATCTCGTCCATGGATTTAACGTTTTGGATGCAAGAGCTCACAATGCTTCTAATATTGTCTTGAAACAAGGAACTCAAAATGTTACCACTAAAAATGCGTCAATACAAGGGGTTCAAAATGCTACAGTGAAAACTGGGGGAGAAAAGGATCATAATATTATTCCAGACGCAGCTCCTATTGATAAGGTGTTGGGAAACAAAAATCAGAATGCTAAGCCTGGGATCTTAGAAGAACCAGCTCAGACACTACCTCTCTTAGATATTGGTCCAAAGAATAGTTCATTTGAAGATGGAGAGAATGTTGTGTCCCTGTCTAGTACCACCATTTCTAAAGACAAACTCCTTGATGGACTTCTGGTTTCATCATTTGATGAAGCATCATGCTTTAGTAGATATCGATCTTACTTATACCGCAAAACTTCCCCTCACAAACCTTCTAAGTATCTTATTTCCAAACTACGAAATTATGAACATCTTCATCGAAGTTGTGGACCTTCTACCAAATTCTACAACAAAATCATGAGAAAGGGTACAAAATTTAACAAAATTGATGTTAGTACGAAGTGCAAATATCTTGTCTGGACAGCTGCCAATGGATTAGGGAACAGGATAGTAACCTTGGTTGCAGCATTTCTTTATGCTATTCTTACCGATCGTGTACTGCTTGTCAAATTTGGGGCCGATATGTCTGGTCTCTTTTGTGAGCCATTTCCTGATTCCTCATGGTTGTTGTCCAGGAGTTTTCCTTATTGGAAAGATCAGAAACATATTGAAACATATGAAAACATATTAAATAATTTCAAGGTAAACAGTTCACAGGTACTTTTGCCACCATTTCTTATTCTTAATCTACAGCACACCCATGATCGTCACAATAATTTTTTTCATTGTGATGGAAGTCAAGATCTTCTTCGAAAAATTTCCGTACTAATTTTACGGTCAGATCAATACTTTGTCCCTTCTCTTTTTATGATTCCATCGTTTAGAGAAGAACTAAGTAAAATGTTCCCCCAGAAGGACACTGTTTTTCACCACCTTGGACGTTACCTTCTTCACCCATCAAATGAAGCATGGGAAATAATTAGAAAATTCTATGAGGCACATCTTGCCAGGGCAAATGAGAGGATAGGTGTGCAGATTAGACTTTTTAATACTCATCGACCACCACATCAAACTGTTATTAATGAAATAGTATCCTGCACCCTTCAGCATAAGTTGCTGCCTGATTTCAACGCACAAAAGTCAGTGGTTTCTCCTTTGAAGAAGACCTCAAAAGCTGTTTTAGTAGCATCTTTGTTCTCAGAATACGGTGAGAAGTTGAAGACTATGTATCAGACAAATAAAACTGTGACCAGGGAAGTAATAAGAGTTTATCAGCCCAGTCATGAAGAGCGTCAAAAGTCAAATGATGACATGCACAACATTAAGGCATGGACAGAAATATATTTGCTGAGTTTGTGTGATGCGTTGGTTACAAGTCCTAAGTCTACTTTTGGTTATGTTGCCCATAGTCTTGGAGGTCTGAAGCCATGGATTTTGAAGAGGGCATATAATGAAACCATCCCAGATCCACCTTGTCGACATGCCAAGTCCATGGAGCCTTGTTTCCATTATCCACCCAAATATGACTGTAGGGACAACAGCACAGTTGATTTTACTTCCCTTTTTCATTATATGAAGCATTGTGAAGATGTATCTGGTGGACTGAAGCTGGTTAATGGTAATCACTAG 1842 0.3844 MDKVGRGFKSFRTLLVVASITLPILITFTLIHQNSVFDLVHGFNVLDARAHNASNIVLKQGTQNVTTKNASIQGVQNATVKTGGEKDHNIIPDAAPIDKVLGNKNQNAKPGILEEPAQTLPLLDIGPKNSSFEDGENVVSLSSTTISKDKLLDGLLVSSFDEASCFSRYRSYLYRKTSPHKPSKYLISKLRNYEHLHRSCGPSTKFYNKIMRKGTKFNKIDVSTKCKYLVWTAANGLGNRIVTLVAAFLYAILTDRVLLVKFGADMSGLFCEPFPDSSWLLSRSFPYWKDQKHIETYENILNNFKVNSSQVLLPPFLILNLQHTHDRHNNFFHCDGSQDLLRKISVLILRSDQYFVPSLFMIPSFREELSKMFPQKDTVFHHLGRYLLHPSNEAWEIIRKFYEAHLARANERIGVQIRLFNTHRPPHQTVINEIVSCTLQHKLLPDFNAQKSVVSPLKKTSKAVLVASLFSEYGEKLKTMYQTNKTVTREVIRVYQPSHEERQKSNDDMHNIKAWTEIYLLSLCDALVTSPKSTFGYVAHSLGGLKPWILKRAYNETIPDPPCRHAKSMEPCFHYPPKYDCRDNSTVDFTSLFHYMKHCEDVSGGLKLVNGNH 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04116 613 Pfam Xyloglucan fucosyltransferase 146 582 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun5g04116 613 PANTHER FUCOSYLTRANSFERASE 2-RELATED 136 610 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun5g04116 613 FunFam Galactoside 2-alpha-L-fucosyltransferase 224 275 - -
Viun5g04116 613 FunFam Galactoside 2-alpha-L-fucosyltransferase 396 549 - -
Viun5g04116 613 Gene3D - 223 275 - -
Viun5g04116 613 Gene3D - 395 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04116 Viun-Chr5 48394839 48398511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04116 144 609 Xyloglucan Fucosyltransferase1 AT2G03220 51.368 2.09e-166 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04116 K13681 - gmx:100799776 924.08