Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04115 ATGGATGATGTAGGAAAGGTTTTCAAGAGCTTCAAAATATTGTTAGTTGTAGCTTCCATAACCTTCTCTATTTTGATCACATTTTTTGTCATAAACCAAAGTTCAGTTTTTGAAATCCTCCAAGAATTTAATGCATTGATTGAAGGAACCCAGAATAATGCTACTAACAAACAAGGGATTCAAAATATTGCAACAGTTCAAGCTACAGAAAAAAAGAATCTCAATATTAGTGAGCCAGTTGTAGTTAAAGGTTTAAAGAATGATGCATTTGAAGATGGAAAGGATTATCTGTCTTTATCTATTAATAATGATAATGATAAGCTCCTTGACGGACTTTTAGATTCCTCAATTGATGAAACATCATGTATTAGTAGGTTTCAATCTTATCTGTATCGAAAAGCTTCTTCTCACAAACCTTCTAAATATTTGATATCCAAGTTACGAAACTATGAACGTCTTCATCAACGTTGTGGGCCTTATACTAAATCCTACAACCAAACCATGGCAAAGGGTGCAAAACATAGCAAAAAAGATGATGATTTAAGGTGCAAATATCTTGTATATGTAACCTCAGATGGCTTAGGGAACAGGATGATAACCTTGGTTTCAACATTTCTCTATGCAATCCTCACAGACCGTGTTCTTCTTGTTAGATTTGACGTTGATATGTTAAATCTCTTTTGTGAGCCATTTTCTGATTCATCATGGATGTTGCCCAAGAATTCCCCTTATTGGAATGATATAAGACAATTTGAAACACCTGAAACCATATCTATGAATAACAAGGAAAACAACTCACGTGAGTTTTTGCCACCAGTCCTTGTTCTTGATTTAATGCACACCCATGTTGATCATACCAATCTTTTTCACTGTGATCAAAATCAAGATCTTCTGCAAAAAGTTCCTGCATTGATTTTAAGGTCAAATCAATATTTTGTCCCTTCTCTTTTTATGATATCCTCTTTTAGACAAGACTTGAACAAAATGTTCCCCAACAAAGACACTATTTTTCACCATCTTGGACGCTACCTTTTTCACCCATCGAATGAAGTTTGGGAACGAATTCAAAAATTATATGAGGCACACCTAGCCAAGGAAAATGAGAGAATTGGTGTACAAGTTAGAGTATTTAATACCCACCAAGCACCAACACAATCCATTGCCAATGAAATTATATATTGCGTCCAACAAAATAAGTTGTTGCCAAAACTCAACATGCAAAGCTCAATGAGTCCTCCTTTGGAAAAGAATACCTCAAAAGTTGTTTTAGTAGTATCTTTATACTCAGCATATGGTGAGAAGCTAAAGACTATATATCAGAGTAATATAAGTTTGAGCAGGGAAATAATAAAAGTGTATCAACCAAGTCACGAAGAGCATCAACATTTTGGTGATGACATGCACAACGTTAAGGCATGGACTGAAATATATTTGTTGAGTTTGTGTGATTCATTAGTTACAACCTCGATGTCCACTTTTGGATATGTTGCTCATAGTCTTGGAGGATTAAAGCCATAG 1518 0.3472 MDDVGKVFKSFKILLVVASITFSILITFFVINQSSVFEILQEFNALIEGTQNNATNKQGIQNIATVQATEKKNLNISEPVVVKGLKNDAFEDGKDYLSLSINNDNDKLLDGLLDSSIDETSCISRFQSYLYRKASSHKPSKYLISKLRNYERLHQRCGPYTKSYNQTMAKGAKHSKKDDDLRCKYLVYVTSDGLGNRMITLVSTFLYAILTDRVLLVRFDVDMLNLFCEPFSDSSWMLPKNSPYWNDIRQFETPETISMNNKENNSREFLPPVLVLDLMHTHVDHTNLFHCDQNQDLLQKVPALILRSNQYFVPSLFMISSFRQDLNKMFPNKDTIFHHLGRYLFHPSNEVWERIQKLYEAHLAKENERIGVQVRVFNTHQAPTQSIANEIIYCVQQNKLLPKLNMQSSMSPPLEKNTSKVVLVVSLYSAYGEKLKTIYQSNISLSREIIKVYQPSHEEHQHFGDDMHNVKAWTEIYLLSLCDSLVTTSMSTFGYVAHSLGGLKP 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04115 505 Gene3D - 181 240 - -
Viun5g04115 505 Gene3D - 349 503 - -
Viun5g04115 505 Pfam Xyloglucan fucosyltransferase 102 505 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun5g04115 505 FunFam Galactoside 2-alpha-L-fucosyltransferase 181 232 - -
Viun5g04115 505 PANTHER FUCOSYLTRANSFERASE 2-RELATED 22 505 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04115 Viun-Chr5 48391883 48393869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04115 102 505 Xyloglucan Fucosyltransferase1 AT2G03220 48.649 1.94e-130 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04115 K13681 - gmx:100814715 644.81