Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04114 ATGGCTAGTGCACGGAAGGGTCACAAGAGTTTCAAACCGTTGTTAGTTGTAGCTTCTATAACTTTTCCCATTTTGATAATATTTTATGTCACACACCAAAATTCAATCTTTGATATCTTCCAAGATGTTAATTTAATGATTGAAGGATTCCACAATACTACTACTAATATTAGCGAGTCAGTTGTAAATAAAGATGCAAAGAATAATACATTTGAAGATGAGAAGAATGATAAGAAGCTCTTTGGTGGACTTTTAGTTTCTTCATTTGATGAAGCATCATGCATCAGTAGGTTTCAATCTTATTTGTACCGAAGACCTTCTCCTTACAAACCTTCTGAATATTTGATATCTAGGTTACGAAACTATGAAAGTCTTCACCAAAGTTGTGGACCGCATACTAAGTCTTACAACGAAATCATAAGAGAGGGTGCAAACTTTAGCAAAGCGGGTGTTGATTCAAAGTGTAAATATCTTGTGTGGACAGCTATAGAAGGCTTGGGGAACAGGATGATATCCTTGGTTTCAACATTTCTTTATGCAATCCTCACCGATCGTGTTCTTCTTGTTAGATTTGAAAATGACATGTTGGATCTCTTTTGCGAGCCATTTCCGAATTCGTCATGGTTGTTGCCTAAGAATTCCACTTATTGGAATGATTTGAGACAGTTTAAAACATGTGAAAACGTGTTTGAGAATAACAAGGAAAACAATTCACACACAGTTCTTTTTCTTGATTTGATGAACAACAATGTTCGTGTTACTAATCGTTTTCATTGTGATCAAAATCAGGATCTTCTACAAAATATTCCCGTGGTGATTTTGCGATCAAATGAGTATTTTGTCCCTTCTCTTTTTCTGACATCCTCGTTTAGACAAGAGTTCAACAAAATGTTCCCTGATAAAGACACTACTTTTCACCTTCTAGGACGCTACCTTTTCCACCCATCAAATGTAGTGTGGAAACGAATTCAGAATGTATATGACTCACACCTAGCCAAGGAAAACGAAAGGATTGGTTTGCAGATTAGAATATATAATACTCGTCAAACACCAGAAGAAACCATTATCAATGAAACTATATCTTGCCTCCAGCAAAATAAGTTGTTGCCACAACTCAACATACAAAGCTCAATGAGTCTCAATTTGGAAAAGAATACCTCGAAAGCTGTTCTAGTGGTATCTTTATACTCAAGATATGGTGAAAGGCTAAAGAGTATATATGAAAATAATACAAGTTTGAGCAGAGAAGTAGTAAAAGTGTATCAGCCAAGTCATGAAGAGCATCAAAATTCAGGTGATAACATACACAACATTAAGGCATGGAGTGAAATATACTTGTTGGGTTTGTGTGATGCATTGATTACAAGCCCTACGTCCACTTTTGGGTATGTTGCTCATAGTCTTGGAGGAATGAAGCCATTGGTTTTGCAAAGTATCTATGGAAGAACTATCCCAAATCTACCTTGTCAACGACTCAAGTATATGGAGCCTTGTTTCCATGATCCTCCTAATTATGATTGTACGACCAATACTAATGTCGATTTTACTTCTCTATTTAATCTTAGACGGTGTGAAGATCAATCAAGAGGGATGAAGATAATTAATTCTTAA 1611 0.3582 MASARKGHKSFKPLLVVASITFPILIIFYVTHQNSIFDIFQDVNLMIEGFHNTTTNISESVVNKDAKNNTFEDEKNDKKLFGGLLVSSFDEASCISRFQSYLYRRPSPYKPSEYLISRLRNYESLHQSCGPHTKSYNEIIREGANFSKAGVDSKCKYLVWTAIEGLGNRMISLVSTFLYAILTDRVLLVRFENDMLDLFCEPFPNSSWLLPKNSTYWNDLRQFKTCENVFENNKENNSHTVLFLDLMNNNVRVTNRFHCDQNQDLLQNIPVVILRSNEYFVPSLFLTSSFRQEFNKMFPDKDTTFHLLGRYLFHPSNVVWKRIQNVYDSHLAKENERIGLQIRIYNTRQTPEETIINETISCLQQNKLLPQLNIQSSMSLNLEKNTSKAVLVVSLYSRYGERLKSIYENNTSLSREVVKVYQPSHEEHQNSGDNIHNIKAWSEIYLLGLCDALITSPTSTFGYVAHSLGGMKPLVLQSIYGRTIPNLPCQRLKYMEPCFHDPPNYDCTTNTNVDFTSLFNLRRCEDQSRGMKIINS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04114 536 Pfam Xyloglucan fucosyltransferase 73 507 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun5g04114 536 Gene3D - 152 250 - -
Viun5g04114 536 FunFam Galactoside 2-alpha-L-fucosyltransferase 153 204 - -
Viun5g04114 536 PANTHER FUCOSYLTRANSFERASE 2-RELATED 37 535 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun5g04114 536 Gene3D - 319 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04114 Viun-Chr5 48386227 48389802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04114 53 535 Xyloglucan Fucosyltransferase1 AT2G03210 44.355 1.80e-145 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04114 K13681 - gmx:100814715 671.003