Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04113 ATGGTTGATGGAAACAATTTGAAGAGTTTCAGAAAATTATTAGCTGCAGCTTTCATGACCTTTCCCATTTTGATCATACTTTTTTGCATATATCAAAACTCAATCTTTGAAGGTCCAAAGAATAATCCATTTGAAGATGTGAAGGATAATCAATTTCTATCTAAAATCCCTGATGACAAACTTCTCGGTGGACTTTTAGTTTCCTCATTTGGTGAAGCATCGTGCATTAGTAGGTTTGAATCTTACTTGTACCGGAAAACTTCTTCTTACAAACCTTCTAAATATTTGATATCTAAGCTACGAAACTATGAGCATCTTCATCAAATTTGTGGACCTTATACTAAATCTTACAATGAAACCATGAAAGAAGGTGCACAATTTGGAAAACATGATGTTGATTCAAGATGTAAATATGTTATATGGATAGCCGCAAATGGCTTAGGGAACAGGATGCTATCCATGGTTTCAACATTTCTTTATGCAATTCTTACAGGCCGCCTTCTTATTGTTAGATTTGACAATGATATGTCGAATCTCTTTTGCGAGCCATTTCCTAATTCTTCATGGTTGTTGCCCAAAAACTCTCCTTTTTCAAATAATTTGAAACAATTTAAAACATTTGAAAGCATGCTTACAAATAACAAGAAAAACAATTCAGAAGAGCTCTTGCCATCAATTGTTTTTCTTACTTTAATGAACTACAATCTTGGTGATACTCGTTTTCATTGTGATCAAAATCAAGATCTTCTTCAAAAAATTCCTATATTGATTTTACAGGCAGATCAATATTTTGCCCCTACTTTTTTTATGATATCCTCTTTTAGACAAGATTTAAACAAAATGTTCCCAGATAAAGATACTATTTTTCACCATCTAGGACGCTACCTTTTTCACCCATCAAATGAGGTTTGGGAAGGAATTCGAAAATATTATGAGACACACCTAGGCAAAGAAAATGAGAAGATTGGCGTACAAATTAGAGTATTTAATGCCGAGCAAACACCAGAAATCATTATCAGTGAAACTATATCTTGCATCCATCAAAATAAGTTGCTGACAAAATTCAACATGCAGAGCTCAATGAATCCTCCTTTGGAAAAAAATACCTCAAAAGTTGTTCTAGTGGTTTCTTTATACTCAAAATATGGTGAGAGTCTAAAGAGTATATATGAAAGTAATACAAGTTTGAGCAGTGGAGTAATAAAAGTGTATCAGCCAAGTCACGAAGAGAATCAAAAGTTAGGAGATAACATGCACAACATCAAGGCATGGATCGAAATATATTTGTTGGGTTTGTGTGATGCATTGGTTACAAGTTCTTGGTCCACTTTTGGGTACGTTGCTAATGGTCTTGCAGGTTTGAAGCCATTGATTTTGCAAAATGTACATGGAAAAATTGTCCCAAATCCACCTTGTCAACAAAACAATTTGGAACCTTGTCTCCATATTCCTCCAAAGTATGATTGTCGGACTAATACCCCGTTCAATGATACTTTTACTTTTTATAATACGAAACACTGCGAAGATTATCCCGGAGGAATAAAGATAATTAATATGTATGACTAA 1566 0.3384 MVDGNNLKSFRKLLAAAFMTFPILIILFCIYQNSIFEGPKNNPFEDVKDNQFLSKIPDDKLLGGLLVSSFGEASCISRFESYLYRKTSSYKPSKYLISKLRNYEHLHQICGPYTKSYNETMKEGAQFGKHDVDSRCKYVIWIAANGLGNRMLSMVSTFLYAILTGRLLIVRFDNDMSNLFCEPFPNSSWLLPKNSPFSNNLKQFKTFESMLTNNKKNNSEELLPSIVFLTLMNYNLGDTRFHCDQNQDLLQKIPILILQADQYFAPTFFMISSFRQDLNKMFPDKDTIFHHLGRYLFHPSNEVWEGIRKYYETHLGKENEKIGVQIRVFNAEQTPEIIISETISCIHQNKLLTKFNMQSSMNPPLEKNTSKVVLVVSLYSKYGESLKSIYESNTSLSSGVIKVYQPSHEENQKLGDNMHNIKAWIEIYLLGLCDALVTSSWSTFGYVANGLAGLKPLILQNVHGKIVPNPPCQQNNLEPCLHIPPKYDCRTNTPFNDTFTFYNTKHCEDYPGGIKIINMYD 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04113 521 Gene3D - 301 464 - -
Viun5g04113 521 PANTHER FUCOSYLTRANSFERASE 2-RELATED 18 518 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun5g04113 521 Gene3D - 133 217 - -
Viun5g04113 521 FunFam Galactoside 2-alpha-L-fucosyltransferase 134 185 - -
Viun5g04113 521 Pfam Xyloglucan fucosyltransferase 56 490 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04113 Viun-Chr5 48376741 48380634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04113 53 517 Xyloglucan Fucosyltransferase1 AT2G03220 44.915 1.15e-142 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04113 K13681 - gmx:100799776 627.861