Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04112 ATGGCAGATGGGAACAGTTTGAAGAGTTTCAAAATATTGTTAGTTGCAGCTTCCATGACCTTTTCCATTTTGATCATATTTTTTTGCACATACCAAAACTCAATCTCTATAGGTCCAAAGAATAATCTATTTGAAGATGTGAAGGATAATCTAATTCTATCTAAAATCACTGATGACAAGCTTCTCGGTGGACTTTTAGTTTCCTCATTTGGTGAAGCATCGTGCATTAGTAGGTTTGAATCTTACTTGTACCGGAAAACTTCTTCTTACAAACCTTCTAAATATTTGATATCTAAGCTACGAAACTATGAACATCTTCATCAAAGTTGTGGACCTAATACTAAATCTTACAATGAAACCATGAAAGAGGGTGCACAATTTGAAAAACATGATGTTGATTCAAGATGTAAATATGTTATCTGGATAGCCGAAAATGGCTTAGGGAACAGGATGTTATCCATGGTTTCAACATTTCTTTATGCAATCCTTACAGACCGCCTTGTTATTGTTAGATTTGACGATGATATGTCAAATCTCTTTTGCGAGCCATTTCCTAATTCTTCATGGTTGTTGCCCAAGAACTCTCCTTTTTCAAATGATTTGAAACAATTTAAAACATTTGAAAGCATGCTTACAAATAACAATGAAAACAATTCACAAGAGCTTTTGCCATCAATTATTTTTCTTACTTTAATGAACTACAATCTTGGTGATACTCGTTTTCATTGTGATCAAAATCAAGATCTTCTTCAAAAAATTCCTATATTGATTTTACAGGCAGATCAATATTTTGCCCCTACTTTTTTTATGATATCCTCTTTTAGACAAGATTTATACAAAATGTTCCCAGACAAAGATACTATTTTTCACCATCTAGGACGCTACCTTTTTCACCCATCAAATGAGGTTTGGGAAGGAATTCGAAAATATTATGAGACACACCTAGGCAAAGAAAATGAGAAGATTGGCGTACAAATTAGAGTATTTAATGCCGAGCAAACACCAGAAATCATTATCAATGAAACTATATCTTGCATCCATCAAAATAAGTTGCTGACAAAATTCAACATGCAGAGCTCAATGAAACCTCCTTTGGAGAAAAATACCTCAAAAGTTGTTCTAGTGGTTTCTTTATACTCGAAATATGGTGAGAGTCTAAAGAGTATATATGAGAGTAATACAAGTTTGAGCACTGGAATAATAAAAGTGTATCAGCCAAGTCACGAAGAGCATCAAAAGTTAGGAGATAACATGCACAACATCAAGGCATGGACCGAAATATATTTGTTGGGTTTGTGTGATGCATTGGTTACAAGTACTTGGTCCACTTTTGGGTACGTTGCTAATGGTCTTGCAGGTTTGAAACCATTGATTTTGCAAAATGTACATGGAAAAATTGTCCCAAATCCACCTTGTCAACAAAACAATTTGGAACCTTGTCTCCATATTCCTCCAAAGTATGATTGTCGGACCAATACCCCGTTCAATGATACTTTTACTTTTTATAATACGAAACACTGCGAAGATTATCCAGGAGGAATAAAGATAATTAATATATTTGTCATTCTTTTGGATCAAATACAATTTCAAAATAGAATGATGGCTGAAGGGAACAATTTGAAGAGTTTCAGAACATTAGTAGTTGCAGCTTCCATGACCATCCCTATTTTGATCATACTTTTTGTCACACACCAAAACTCAGTATATGATATCCTCAAAGAATACAATGTATTCATTGAAAGAGCCAACGATATTGCTACTAATAAACAGAAGACTCAAAATCCAGATGTGAAGGATGATGAAGAGAAACTTCACGGTGGACTTTTAGTTTCCTCATTTGATGAAGCATCATGTATTAGTAGGTTTCAATCTTATTTGTATCGGAAGGCATCTCCTTACAAACCTTCTAAATATTTGATATCCAAGCTACGAAACTATGAAAATCTTCATCAACGTTGTGGACCTTATACTAAGTCTTACAACAAAACCATGAAAGAGGGTGCAAACTTTAGCAAAAATGGTGTTGATTCAATGTGCAAATATCTTATCTGGACAATTGCAGATGGCTTAGGGAATAGGATGATATCTATGGTTTCAGCATTTCTTTATGCAATCCTCACAGATCGCGTCCTTCTTGTTAGATTTAATGATGAGATGTTGAATCTCTTTTGCGAGCCATTTCCTAACTCGTCATGGATGTTGCCTGAGAACTTCCCTTTTCCAAATGATTTGAATCAACTTCAAACATTTGAAAGCATTATTGCGAAAAACAAGGAAAACAACTCACAAGACCTTTTGCCATCAATTAGTTTTCTTCCTTTAATGAACTACAATAGTGGTAATTCTCGTTTTCATTGTGATAAAAATCAGGATCTTCTACGAAAAATTCCCGTGCTGATTTTACAGTCACATGAATATTTTGTCCCTTCTCTTTATATAGTATCCTCATTTAGACAAGACTTCGACAAAATGTTCCCCGACAAAGACACTACTTTTCACCTTCTAGGACGTTACCTTTTCCATCCATCAAATATAGCGTGGGAACGAATTAAGAATGTATATAAGGAACACCTAGCCAAGGTAAATGAAAGGATTGGGTTGCAAATTAGAATATATAATATTCGTGATACACCAGAAGAAACCATTATCAATGAAACTATATCTTGCCTCGAGCAAAATAAGTTGTTGCCAAAATTCAACATGAGTTCTCCTTTGGAAAAGAATACCTCAAAAGTTATTTTAGTGGTTTCTTTATACTCAAAATATGGTGAGGGGCTAAAGAGTATATATGAAAGTAATACAAGTTTGAGCAAGGAAGTAATAAAAGTGTATCAGCCAAGTCATGAAGAGAATCAAAATTCAGGTGATAACATGCACAACATTAAGGCATGGGTCGACATATATTTGTTGGGTTTGTGTGATACATTGGTTACAAGCCCAGGGTCCACTTTTGGGTATGTTGCTCATAGTCTTGGAGGAATGAAGCCATTGATTTTGAAAAGTATAGATGGAAAAACTATCCCAGATCTACCTTGTCAACGACTCAAGGACATGGAACCTTGTTACTATGATCCTCCCAATTATAATTGTGCCTCTGATATCCCAGTCGATTACACTTCTATTTTTCATAATATTAAACGTTGTATAGATCTACCACAAGGAATGAGGATAATTAATACGTAG 3183 0.3465 MADGNSLKSFKILLVAASMTFSILIIFFCTYQNSISIGPKNNLFEDVKDNLILSKITDDKLLGGLLVSSFGEASCISRFESYLYRKTSSYKPSKYLISKLRNYEHLHQSCGPNTKSYNETMKEGAQFEKHDVDSRCKYVIWIAENGLGNRMLSMVSTFLYAILTDRLVIVRFDDDMSNLFCEPFPNSSWLLPKNSPFSNDLKQFKTFESMLTNNNENNSQELLPSIIFLTLMNYNLGDTRFHCDQNQDLLQKIPILILQADQYFAPTFFMISSFRQDLYKMFPDKDTIFHHLGRYLFHPSNEVWEGIRKYYETHLGKENEKIGVQIRVFNAEQTPEIIINETISCIHQNKLLTKFNMQSSMKPPLEKNTSKVVLVVSLYSKYGESLKSIYESNTSLSTGIIKVYQPSHEEHQKLGDNMHNIKAWTEIYLLGLCDALVTSTWSTFGYVANGLAGLKPLILQNVHGKIVPNPPCQQNNLEPCLHIPPKYDCRTNTPFNDTFTFYNTKHCEDYPGGIKIINIFVILLDQIQFQNRMMAEGNNLKSFRTLVVAASMTIPILIILFVTHQNSVYDILKEYNVFIERANDIATNKQKTQNPDVKDDEEKLHGGLLVSSFDEASCISRFQSYLYRKASPYKPSKYLISKLRNYENLHQRCGPYTKSYNKTMKEGANFSKNGVDSMCKYLIWTIADGLGNRMISMVSAFLYAILTDRVLLVRFNDEMLNLFCEPFPNSSWMLPENFPFPNDLNQLQTFESIIAKNKENNSQDLLPSISFLPLMNYNSGNSRFHCDKNQDLLRKIPVLILQSHEYFVPSLYIVSSFRQDFDKMFPDKDTTFHLLGRYLFHPSNIAWERIKNVYKEHLAKVNERIGLQIRIYNIRDTPEETIINETISCLEQNKLLPKFNMSSPLEKNTSKVILVVSLYSKYGEGLKSIYESNTSLSKEVIKVYQPSHEENQNSGDNMHNIKAWVDIYLLGLCDTLVTSPGSTFGYVAHSLGGMKPLILKSIDGKTIPDLPCQRLKDMEPCYYDPPNYNCASDIPVDYTSIFHNIKRCIDLPQGMRIINT 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04112 1060 PANTHER FUCOSYLTRANSFERASE 2-RELATED 19 517 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun5g04112 1060 Pfam Xyloglucan fucosyltransferase 588 1030 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun5g04112 1060 Pfam Xyloglucan fucosyltransferase 58 490 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun5g04112 1060 Gene3D - 133 193 - -
Viun5g04112 1060 Gene3D - 676 757 - -
Viun5g04112 1060 Gene3D - 301 464 - -
Viun5g04112 1060 Gene3D - 847 1001 - -
Viun5g04112 1060 FunFam Galactoside 2-alpha-L-fucosyltransferase 677 728 - -
Viun5g04112 1060 FunFam Galactoside 2-alpha-L-fucosyltransferase 134 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04112 Viun-Chr5 48364562 48372088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04112 19 517 Xyloglucan Fucosyltransferase1 AT2G03220 42.745 9.83e-138 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04112 K13681 - gmx:100814715 639.032