Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03642 ATGGCCGAAATGGAAGAAATTGGACCTGATGTCTGTTCGGATTTAGAAGTGGATGACATTAGATGCCCCAATATAGCAGAGAAAGATGTGAGTGATGAAGAGATTGATGCAGAAGAATTGGAGCGGCGAATGTGGAAGGATCGAATCAAACTCAAAAGGCTAAAGGAAAGACAGAAGCTGGCGATTCAACAAGCTGCAGAGAAGCAAAAGCCAAGGCAGTCCAGTGATCAAGCTCGAAGGAAGAAAATGTCAAGAGCACAGGATGGGATTCTGAAGTATATGCTGAAGCTTATGGAAGTGTGCAAAGCTCGTGGATTTGTGTATGGGATCATTCCTGAGAAGGGGAAGCCAGTTAGTGGTTCCTCTGATAACATTAGAGCTTGGTGGAAGGAGAAGGTAAAGTTTGATAAGAATGGCCCTGCAGCTATAGCCAAGTATGAAGCTGAGTGTCTTGCTATGAGTGAGGCAGATAACAGCCGAAATGGTAACTCGCAGAGCATTCTCCAAGATCTGCAAGATGCAACACTTGGATCACTCTTGTCTTCTTTGATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCATTGGAAAAGGGTGTGCCTCCACCATGGTGGCCAACTGGTAATGAAGATTGGTGGTCACAGTTGAATTTACCTCATGGTCAGAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTCACTGCTGTTATAAAGCACATGTCACCTAATATTGCAAAGATAAGGAGGCATGTTCGGCAATCAAAATGCTTGCAGGACAAGATGACGGCAAAGGAAAGCGCGATTTGGTTGGGCGTTTTAAGTCGAGAAGAAGCTCTCATTAGACAGCCTAGTAGTGACAATGGAACATCTGGAGTAACTGGAATGCTACCTGGTGTTCCTGCTGAGAATAAGCAAGCTGCTAGCAGTGCAAGCAACTATGATGTTGATGGTACTGATGATGGCATTGGTTCTGTTTCGTCTAAAGAGGATAGGAGAATTCAGATTGTGGAAACCGAACCACCAGTTAACTTGCGCAGGGTTAGGAAGCCTGGCCAAGATAGAGATCAATCTAAGCAGCGACGGCTGCCGAAAAAACCCCGAGTGTCATCAAGGACTGTTGACAAACCGCCAGCACAATCTGACAACGAAGTTTTGCATGCTGAGCCAAGAAGTAAAGGGCTGAATATTAACCAGACAGGAGCAGAAGTAGCTCGAATCCAGATTCATGGAAATGAACAGTCCAATGAGACAGATTCTGCTGCAAGGCCACTGGAAAAGGAGCTTGAGGTGCCTGCACAACTACCAGCACCCGAGTTTGATCATTACTCTTATTTACATACAAACAACTTAATTTCCTCAGAAAGTATTTATACGAGTGGAAGGCCAATACACTATCCTGAGTTGCAAAACCCTGGCATGCATCATCATGAACCCTCTTATAATCTTTATAATCCAGCAACAGGGTATGAACCTGGTCATAGGCAGCAGCTACATCCTGGGAACAACAGTGAAGGAAGGCCAGATATTGATGCAGTTCATGCACAAGGTGTGCATATGAAAGGGGATGAAATGACTGGAGGTGATTTGCAATACTTTGGTAAAGATGCATTTCAGAATGAGCTTGATAGACCTATGGATCACTCTTTCTTTGGATCACCGCTTAGTAACATGTCATTAGATTTTGGAGGACTTAACAGTCCATTCCATTTAGATGATTTCTTGGGTGATGATGAAATGATACAGTACTTTGGAGCATAA 1782 0.4405 MAEMEEIGPDVCSDLEVDDIRCPNIAEKDVSDEEIDAEELERRMWKDRIKLKRLKERQKLAIQQAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNSRNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGTSGVTGMLPGVPAENKQAASSASNYDVDGTDDGIGSVSSKEDRRIQIVETEPPVNLRRVRKPGQDRDQSKQRRLPKKPRVSSRTVDKPPAQSDNEVLHAEPRSKGLNINQTGAEVARIQIHGNEQSNETDSAARPLEKELEVPAQLPAPEFDHYSYLHTNNLISSESIYTSGRPIHYPELQNPGMHHHEPSYNLYNPATGYEPGHRQQLHPGNNSEGRPDIDAVHAQGVHMKGDEMTGGDLQYFGKDAFQNELDRPMDHSFFGSPLSNMSLDFGGLNSPFHLDDFLGDDEMIQYFGA 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03642 593 FunFam Ethylene insensitive 3-like 1 159 295 - -
Viun5g03642 593 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Viun5g03642 593 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Viun5g03642 593 Pfam Ethylene insensitive 3 38 285 IPR047091 GO:0003700
Viun5g03642 593 Coils Coil 37 57 - -
Viun5g03642 593 MobiDBLite consensus disorder prediction 331 379 - -
Viun5g03642 593 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Viun5g03642 593 FunFam Ethylene insensitive 3-like 1 72 150 - -
Viun5g03642 593 MobiDBLite consensus disorder prediction 289 405 - -
Viun5g03642 593 MobiDBLite consensus disorder prediction 61 83 - -
Viun5g03642 593 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 580 IPR006957 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03642 Viun-Chr5 45672219 45675363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03642 16 576 EIL Transcription Factor Family AT1G73730 54.688 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Viun5g03642 EIN3 5.4e-127 No_clan