Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02305 ATGGATATGACGGAAATTTCAATCTTGCACCATGTGGGGATTGTGCTGATTGCGATTTGGATTCTCTCTGCACTCAATTCGTGCCACTCCGTTGTTTATTTTGTAGCTTTGATTTATCTTTTCCTGGTCCATGAGCGTTTTGTTACGAGGCTGCGGAAGAAGTTGCAGTTTGAGGAGAGGAAGCAAGCTAATCAAAGAAGGGTACTTTCAGATTCTGAAACAGTCCGGTGGTTGAACCATGCAGTTGAAAACATATGGCCTATATGTATGGAACATATTGCCTCTCAGAAGATATTATTCCCTATCATACCATGGTTCTTAGAGAAGTACAAACCTTGGACTGCTAAGGAAGCTGTTGTTCAGCACCTATACCTGGGAAGAAATCCACCTATGTTTACTGAAATCAGGGTTCTTCGCCAGACTGAGGATGACCACTTGGTTCTGGAGTTAGGAATGAATTTTCTTTCTGCTGATGATATGAGTGCAATACTCGCAGTCAAACTAAGGAAAAGATTGGGGTTTGGAATGTGGGCAAAATTGCACATTACAGGCATGCATATCGAAGGGAAGATATTAGTTGGGGTAAAGTTTCTCCCAACATGGCCTTTTCTTGGCCGTTTGCGTGTATGCTTTGTTGAACCTCCATATTTTCAAATGACTGTCAAACCTATTTTTACTCATGGGCTTGATGTGACTGAACTTCCAGGCATTGCTGGGTGGCTAGATAAGTTGCTGTCTATTGCTTTTGAACAGACCCTTGTGGAGCCCAATATGCTGGTTGTTGATGTTGAGAAATTTGTTTCGCCACAGCAAGAATGTTGGTTCTCTGTGGATGAGATGGAGCCTGTTGCATATGCAAAAGTAGAAGTTATTGAAGCAACTGACATGAAGCCATCAGATCTAAATGGTTTAGCGGATCCTTATGTGAAAGGTCATATGGGTGGATACAGATTTAGGACAAAAATACAAAGGAAAACACTTACTCCAAAATGGCACGAGGAATTTAAAATTCCCATCATAACATGGGAGTCTGATAATGTGCTAGTTATTGCAGTTCGTGACAAGGACCATTTCTATGATGATATCCTTGGGGACTGTTCTGTGAACATCAACGACTTTAGGGATGGACAAAGACACGATATATGGCTGCAACTTGAGAACATGAAAATGGGGAGACTGCGTTTGGCAATAACTATTCTTGAAGCTAATGGAAAGGAAAACATGGAGTTTGAAGTACGAAAAAACTCATTTGGAGCACATAACACTGCTGATAATAGTTCCCCTTCACATGTTCCACCTGAAAATTCTCAGAAGTTGGCAGATAACTATGAACCTATAGACATTGAAGGACAAAAGGAGACAGGAGTTTGGGTTCATCACCCAGGAAGTGAAGTTTCCCAAAAGTGGAAGCCTAGGAAAGGGAAGAGTCGGCGCCTTGATACTGAAATTCGTGGAGAATCTAATGATTTAGTTGGCAGCGGTAGATCAACCGAATCTGGATCCTTGAACAATGACAGCAGCAGTTCTGATAACAATCCCGAAGAAAAGCACCGGCTGAGATCGTTCAGGAGGGGTCTGCACAAGATTGGTTCAGTATTCCACCGAAAAAGGGGGGAGGAGCCGGTTCAAGAGGACACTCTATCTCCACGTGATAACATTAGGGCAATGAATTCTAAGGGGATGATTGGTGTGAAGTTTGTGATGGATGAGAACATTTCTGACTTTCCAACTCCTAAGGTTCAGGAAGAAGGGGGTTCGATTGAAGAGAGTGGTTCTGAAATCCCTGCAAAGGGAAATGCGAAGGATGTTGCAAAGAATTTTTTGAAACAAGCAGCAGGAAAATCGGCTCGAGGCTTCAAACAAGTTATTTCTTGTAAATCAAGGAAATCTAAAGATGAGTCTCAAGCACTTCCAGAAAGGGTAAACGAATCTGATTCTTCAGATGATGAATCTCCCAAAGTTGAAAGAATTTCAGTTGGTTCTGAGGCTATGGCCCCAGGCAGCAATGGTTCCCCCAATTCTAAGGTACATGTGGTTCAAACAGTTCCTTCTAACACTCATGAGGACAATGAAGCCCCAATGAATGTAGCTAACGTAAAAGATGACCCTGAAAAGGCATCTTCCCCTGAAAGGTCAAGTAAAGAGTTTGTTAAATCTGATGAATTGGAGCATGTTAAAGAGGAAATTGTGGGTAGATAA 2199 0.4206 MDMTEISILHHVGIVLIAIWILSALNSCHSVVYFVALIYLFLVHERFVTRLRKKLQFEERKQANQRRVLSDSETVRWLNHAVENIWPICMEHIASQKILFPIIPWFLEKYKPWTAKEAVVQHLYLGRNPPMFTEIRVLRQTEDDHLVLELGMNFLSADDMSAILAVKLRKRLGFGMWAKLHITGMHIEGKILVGVKFLPTWPFLGRLRVCFVEPPYFQMTVKPIFTHGLDVTELPGIAGWLDKLLSIAFEQTLVEPNMLVVDVEKFVSPQQECWFSVDEMEPVAYAKVEVIEATDMKPSDLNGLADPYVKGHMGGYRFRTKIQRKTLTPKWHEEFKIPIITWESDNVLVIAVRDKDHFYDDILGDCSVNINDFRDGQRHDIWLQLENMKMGRLRLAITILEANGKENMEFEVRKNSFGAHNTADNSSPSHVPPENSQKLADNYEPIDIEGQKETGVWVHHPGSEVSQKWKPRKGKSRRLDTEIRGESNDLVGSGRSTESGSLNNDSSSSDNNPEEKHRLRSFRRGLHKIGSVFHRNXRGEEPVQEDTLSPRDNIRAMNSKGMIGVKFVMDENISDFPTPKVQEEGGSIEESGSEIPAKGNAKDVAKNFLKQAAGKSARGFKQVISCKSRKSKDESQALPERVNESDSSDDESPKVERISVGSEAMAPGSNGSPNSKVHVVQTVPSNTHEDNEAPMNVANVKDDPEKASSPERSSKEFVKSDELEHVKEEIVGR 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02305 733 MobiDBLite consensus disorder prediction 418 436 - -
Viun5g02305 733 Gene3D C2 domain 271 402 IPR035892 -
Viun5g02305 733 Pfam C2 domain 287 385 IPR000008 -
Viun5g02305 733 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
Viun5g02305 733 MobiDBLite consensus disorder prediction 465 485 - -
Viun5g02305 733 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 700 - -
Viun5g02305 733 MobiDBLite consensus disorder prediction 576 733 - -
Viun5g02305 733 CDD C2 287 385 - -
Viun5g02305 733 MobiDBLite consensus disorder prediction 665 693 - -
Viun5g02305 733 MobiDBLite consensus disorder prediction 533 548 - -
Viun5g02305 733 MobiDBLite consensus disorder prediction 490 509 - -
Viun5g02305 733 MobiDBLite consensus disorder prediction 626 657 - -
Viun5g02305 733 SMART C2_3c 285 382 IPR000008 -
Viun5g02305 733 MobiDBLite consensus disorder prediction 416 555 - -
Viun5g02305 733 MobiDBLite consensus disorder prediction 704 733 - -
Viun5g02305 733 CDD SMP_SF 95 262 - -
Viun5g02305 733 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Viun5g02305 733 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 279 401 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02305 Viun-Chr5 30846747 30852979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02305 278 397 Lipid Metabolism Gene Families AT3G61300 30.400 3.05e-10 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02305 5 30846747 30852979 Viun5g02305 5 30846747 30852979 ECH