Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00336 ATGGATCCTCCACCGCTCTCTGCCGCAACCATCATCACCACCACCACTCATAAGCACCATCCCGATTCGGTAGAGTCTTCGTCTCCACGTTCCCGCAATGCAGAAACATGGAATGATGAGAATCTACCGGTGGTTCCCGGCGCCAAGCTGCGCCTCATGTGCAGCTATGGTGGCCACATCATGCCACGCCCTCACGACAAGACTCTCTGCTACGTCGGCGGTGACACAAGGATTGTGGTGGTGGACCGCCACTCCTCGTTGAAAGATCTGTGTGCACGGCTTTCCCGAACCATTCTCCATGGAAGACCCTTCACACTCAAGTACCAGCTTCCCAACGAAGACCTCGATAGCCTCATCACTGTCACCACTGACGAAGATCTCGACAACATGGTGGAAGAGTACGATCGAATTATGGCGAAAGGTACGGCTTCTTCACGGCTCAGGGTGTTCCTGTTCTTCACCAAACCTGAGGCCACGGTTTCAATGGGGTCACTACTTGATGATGTGAAGTCAGAGACATGGTTTGTAGATGCACTCAACAACTCTGGAATGTTAACCAGAGTAGTTTCAGATACTGCTGCAGGGAATTCTTTTGTGAACCTTGATAGTGACGGTGGTGGTGGAGGTGTTAGTGGCAGTGGTTCAAGCAACAACTTGGAGGCTTTGCCTGATACTAACAATAACAAAGCCAAGAACTTTCCTGATGTGGTGCAATCAAGCCCTGGTTCACCTATGATGGAAAACAGTTCCTCTTCTTCTCCTTCTTTCTCTCCTTCTCTGGCAAATCTTCCTCCCATTCGGGTACGTGTTGATGACAACAGTAGTAGGCTTCAGCAAGAGAACAAGGTTGGGGGGCTGGTGGAGGAGCAGTTGGCTCAGATGACAATTGCAAGTGGGGTGAAGCAAGATGATGGATTGGTGAGTGTGGTTTCTTCTGCAGTGGCTGCTCCTGCAATTCCTGCAGCTGTGACTATGGTTACTACCAGTGATAATGTGATGAACAGAGTTGTTTCTGAGGATGAGAGATCTGATCTCGGGTTTCGGAAGCCCCCTTTACCATTGCAGCTCGTGCAGCCAAGGACTAGTGGTGGTTTGAATTTGCCTTCTCCTGATTCAGTTGCAAGTGATAGTAGTATTGCATCTGCAAATTCTTTCTCCAAGACTGTTTACTACCAAGACCAAGTCCAAGCTGCACAACTAGACAACAAACTAGTTGCTTTCTCAAATGCCAAGAGTGAAATACCTGATCAGGTGATTCAGGTTCATGATTCTGGCTACACATTACCCCCACAATTAGACCAAAATAGACAACTTCAGCAGCAAAAGCCCTTGGTCCATGCCAGCTCTCACTACATAGGGCAAGTACCAGTTTCATCATACTACCCAGTTTATGCCCCACCACAACAACAACAACTTCACCCTCCAATTGCTCAGCAACAGTACCCAGTTTATGTGATGCCTGTTGGACCCACACAAGTAACACAACCATACAACATCATGGGTGACCCAAATGTGTTGGTCTCAGGCAGAACCCTAATACCACAAAGTGCTGTTACCTCAGCAGCATACAAGGATGGTACTCCACCTATCTATCCCACCAAGTCAGTTAGCCCTACTATACCTGATGTCACTCCAAGTGTTTACAAGGCTCCTCCTGTGGCCTCAAATCCTGCATATGCTCCAATACCTCCCAATCAATTTCAGCCACAGTATGTGGGGTTTCAGCCACAGTCTCAGTTCCATCATCCACCACAGTCCATTGCTGTGGCTCCCTCTAGTACTACTACTAATTATGGCTATGAATATGGTGGCCATGTGCAAGACCAAGGTTACTACACCCATCAACAAACCACTACTGCTCCATTGCTTCCTCAGTACCAATCCATGACCCCAGCTGCAGCTGCTGCAGCACTCTCAGATGCTTCAAAACAGTACCCTGCAGACAGCATTCAGCAGCAAAATAGAGCATCACAGCCGGTGTGA 1983 0.4856 MDPPPLSAATIITTTTHKHHPDSVESSSPRSRNAETWNDENLPVVPGAKLRLMCSYGGHIMPRPHDKTLCYVGGDTRIVVVDRHSSLKDLCARLSRTILHGRPFTLKYQLPNEDLDSLITVTTDEDLDNMVEEYDRIMAKGTASSRLRVFLFFTKPEATVSMGSLLDDVKSETWFVDALNNSGMLTRVVSDTAAGNSFVNLDSDGGGGGVSGSGSSNNLEALPDTNNNKAKNFPDVVQSSPGSPMMENSSSSSPSFSPSLANLPPIRVRVDDNSSRLQQENKVGGLVEEQLAQMTIASGVKQDDGLVSVVSSAVAAPAIPAAVTMVTTSDNVMNRVVSEDERSDLGFRKPPLPLQLVQPRTSGGLNLPSPDSVASDSSIASANSFSKTVYYQDQVQAAQLDNKLVAFSNAKSEIPDQVIQVHDSGYTLPPQLDQNRQLQQQKPLVHASSHYIGQVPVSSYYPVYAPPQQQQLHPPIAQQQYPVYVMPVGPTQVTQPYNIMGDPNVLVSGRTLIPQSAVTSAAYKDGTPPIYPTKSVSPTIPDVTPSVYKAPPVASNPAYAPIPPNQFQPQYVGFQPQSQFHHPPQSIAVAPSSTTTNYGYEYGGHVQDQGYYTHQQTTTAPLLPQYQSMTPAAAAAALSDASKQYPADSIQQQNRASQPV 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00336 660 MobiDBLite consensus disorder prediction 644 660 - -
Viun4g00336 660 Gene3D - 67 153 - -
Viun4g00336 660 MobiDBLite consensus disorder prediction 1 39 - -
Viun4g00336 660 ProSiteProfiles PB1 domain profile. 49 152 IPR000270 GO:0005515
Viun4g00336 660 MobiDBLite consensus disorder prediction 209 260 - -
Viun4g00336 660 MobiDBLite consensus disorder prediction 206 260 - -
Viun4g00336 660 PANTHER OS05G0427100 PROTEIN-RELATED 21 491 - -
Viun4g00336 660 MobiDBLite consensus disorder prediction 634 660 - -
Viun4g00336 660 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 69 154 - -
Viun4g00336 660 SMART PB1_new 64 154 IPR000270 GO:0005515
Viun4g00336 660 CDD PB1_UP2 53 152 - -
Viun4g00336 660 Pfam PB1 domain 66 152 IPR000270 GO:0005515
Viun4g00336 660 SUPERFAMILY CAD & PB1 domains 65 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00336 Viun-Chr4 2068186 2070951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00336 48 216 MAP Kinase Kinase Kinase AT1G16270 37.931 1.97e-27 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03774 7 38098753 38101435 Viun4g00336 4 2068186 2070951 ECH
Viun4g00336 4 2068186 2070951 Viun4g00336 4 2068186 2070951 ECH