Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04592 ATGAAGAAGTTCCCACTCTCACACTCCGATTTGGACTCTAAATGTGCCTTCACTTTCTCACTCATGCGTTTGATGGCTTTTTTCGTCGCTACTTTCGTTCTCTGCTCTGTTATTTTCTCTGTCTCCGTTGTTCTTCGAGACCCTCCCTCAGATGCGGCACTTCGCGAACCCTCATCACTCACCCCTCTCTTTCAAATCACTCAAGATTTGGACAATGATACCTCTGATTCTGTTCAGTTGCTTCGAGATAAACTGCACGGTGGCCTTTTAGTTGATGGATTTGATGAAAATTCCTGTCTCAGCAGATACCAATCAGCCGAGTATCATCTCAAAGGGCTGTCGGGAAACCCTTCTTCTTACCTCATTTCTAGGTTAAGAAAATATGAAGCTCAACACAAACAGTGTGGACCTTACACTGAATTCTATAACAAAACAGTGGAACAACTTAGGTCTGGTAAATTTACGGAGTCCTCACCTTGTAAATATGTTGTATGGATTTCATTTAGTGGGTTAGGGAATAGGATATTGACCCTAGCTTCTGCATTTCTTTATGCTCTTCTCACAAACCGTGTTCTGCTGGTTGACCCTGGAGTGGATATGGCTGATCTTTTTTGTGAGCCATTTCCAGATACTTCCTGGTTTCTCCCTGCTGATTTTCCTCTTACCGCTCAGTTTAATAGTTTCAGTCAGAAATCTGATGAATGTCATGGGAAAATGCTGAAAAATAAATTGGTTGTAAATTCCAATGTTCCTTCTTTTGTCTACCTTCACATAGTCCACGATTATGATGATCATGATAAGCTTTTCTTTTGTGATGAAGAGCAACATTTTCTCCAGGAAGTGCCTTGGTTAGTGATGAAAACAGATAATTACTTTGTCCCATCTCTATTCTTGATGCCATCATTTGAGCAGGAGCTGAATGATCTCTTCCCAAATAAAGAAACAGTTTTCCATTTCTTGGGTAGGTATCTGTTCCACCCCACTAACAGTGTGTGGGGACTTGTTACCAGATACTATCAAGCTTATTTAGCTAAAGCCGATGAAAGAGTGGGGATACAAATTAGAGTGTTTGACACAGAACCCGGTCCATTTCAACATGTATTGGATCAGATCTTAGCTTGTACTTCCAAGCATAAACTTTTGCCTGATGTTAACAATCAGCAGGATGCTACCAATTCATCAGGAAGTCCCAAGTCAAAAGCGGTGTTGATGGCATCCTTAAGCTCTGGTTATTTTGAAAAGGTAAGAGACATGTATTGGGAATACCCTACGGTGACAGGAGAAGTTGTTGGTGTTTACCAGCCGAGCCATGAAGGATATCAACAAACACAGAAGCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACTGATGTGTTGGTTACAAGCTCTTGGTCTACTTTTGGCTATGTGGCTCAGGGGCTTGGAGGTTTAAAACCATGGATTCTGTACAAACCTGAGAACCGAACAGCCCCAGATCCTCCCTGTCGGCGTGCCATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGATTGCAAGGCCAAGAGAGGAACTGACACAGGTGAACTTGTTCCGTATGTGAGGCACTGTGAGGATATGAGCTGGGGCCTTAAGCTTGTAGACACTGATACTTATCGCTAG 1662 0.426 MKKFPLSHSDLDSKCAFTFSLMRLMAFFVATFVLCSVIFSVSVVLRDPPSDAALREPSSLTPLFQITQDLDNDTSDSVQLLRDKLHGGLLVDGFDENSCLSRYQSAEYHLKGLSGNPSSYLISRLRKYEAQHKQCGPYTEFYNKTVEQLRSGKFTESSPCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMADLFCEPFPDTSWFLPADFPLTAQFNSFSQKSDECHGKMLKNKLVVNSNVPSFVYLHIVHDYDDHDKLFFCDEEQHFLQEVPWLVMKTDNYFVPSLFLMPSFEQELNDLFPNKETVFHFLGRYLFHPTNSVWGLVTRYYQAYLAKADERVGIQIRVFDTEPGPFQHVLDQILACTSKHKLLPDVNNQQDATNSSGSPKSKAVLMASLSSGYFEKVRDMYWEYPTVTGEVVGVYQPSHEGYQQTQKQMHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPYVRHCEDMSWGLKLVDTDTYR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04592 553 Pfam Xyloglucan fucosyltransferase 65 520 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun3g04592 553 Gene3D - 334 498 - -
Viun3g04592 553 PANTHER FUCOSYLTRANSFERASE 2-RELATED 26 548 IPR004938 GO:0008107|GO:0016020|GO:0042546
Viun3g04592 553 FunFam Galactoside 2-alpha-L-fucosyltransferase 333 487 - -
Viun3g04592 553 FunFam Galactoside 2-alpha-L-fucosyltransferase 158 209 - -
Viun3g04592 553 Gene3D - 157 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04592 Viun-Chr3 53546488 53548613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04592 22 547 Xyloglucan Fucosyltransferase1 AT2G03220 62.998 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04592 K13681 - gmx:100803305 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04592 3 53546488 53548613 Viun3g04592 3 53546488 53548613 ECH