Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04327 ATGGGTTCTTCTGTGACATCCATGTCTTCTTCTACCATCCTCCTCATTACCATCTGCACACTGTCCTCAATTCTGTCAGCTTCTTCTGCAACAGCAGCAGCAGCATCTGAGGAAGGAAGGACAAGACCCTTTAAGAGGGTTTATGCCTTTGGGGATTCTTTTACTGACACAGGCAACACCAAGAACGCAGAAGGTCCAAGTGGCTTTGGCCATGTCTCAAACTCTCCCTACGGCACCACTTTCTTCAACCACTCCACCAACAGGTACTCCGATGGAAGGCTTGTCATTGACTTCGTCGCCGAAGATCTTTCGCTGCCTTACTTGCCCCCTTATCGCCACCGCAAACCCAACGACACTTTCGGTGTTAACTTTGCCGTCGCCGGTTCCACCGCCATAAACCACTTGTTCTTTGTCAGGAACAACCTCTCCCTTGACATCACTCCCCAGTCCATCCAAACTCAGATGATATGGTTCAACAGGTATTTGGAAAGCCGCGAATGTGAAGAATTAAATTGCAAAGACTTTGACGATACTCTATTTTGGTTTGGGGAGATTGGTGTCAACGACTACGCCTACACTCTCGGATCTACCGTCTCAGATGATACCATAAGAAAGCTTGCAATCAGTAGTGTCTCAGGAGCATTACAGGCATTGCTAGAGAAGGGTGCGAAATACCTAGTTGTGCAGGGTTTACCTCTTACTGGGTGTTTGACATTGACCATGTATCTGGCTCCTCCTGATGACAGGGATGAGCTTGGGTGTGTGAAAAGTGTGAACAACCAAAGCAATTACCACAACCTTGTACTGCAAAACAAACTAGAGGAATTTAGGAAACAGTACCCAGAAGCTGTCATACTTTATGCTGATTACTTCAACGCATACCGCACTGTGATGAAGAATCCGACCAAGTATGGATTCAAAGAAGTGTTCAATGTTTGTTGTGGATCAGGAGAACCACCTTACAGCTTCAGTGTGTTCGGCACGTGTGGCACACCTAACGCCACTGCCTGCACAAACCCTTCTGAGTTCATAAATTGGGATGGTGTTCACCTCACTGAGGCCATGTATAAAGTTATTTCTAGCATGTTTCTGCAAGGAAACTTCACCCAACCTCCCTTTAATTTTATGTTGGCAAAGAAAGAGAGGGCGGGGTGA 1155 0.4658 MGSSVTSMSSSTILLITICTLSSILSASSATAAAASEEGRTRPFKRVYAFGDSFTDTGNTKNAEGPSGFGHVSNSPYGTTFFNHSTNRYSDGRLVIDFVAEDLSLPYLPPYRHRKPNDTFGVNFAVAGSTAINHLFFVRNNLSLDITPQSIQTQMIWFNRYLESRECEELNCKDFDDTLFWFGEIGVNDYAYTLGSTVSDDTIRKLAISSVSGALQALLEKGAKYLVVQGLPLTGCLTLTMYLAPPDDRDELGCVKSVNNQSNYHNLVLQNKLEEFRKQYPEAVILYADYFNAYRTVMKNPTKYGFKEVFNVCCGSGEPPYSFSVFGTCGTPNATACTNPSEFINWDGVHLTEAMYKVISSMFLQGNFTQPPFNFMLAKKERAG 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04327 384 Gene3D SGNH hydrolase 34 367 IPR036514 -
Viun3g04327 384 Pfam GDSL-like Lipase/Acylhydrolase 47 361 IPR001087 GO:0016788
Viun3g04327 384 SUPERFAMILY SGNH hydrolase 44 364 - -
Viun3g04327 384 CDD SGNH_plant_lipase_like 47 367 IPR035669 -
Viun3g04327 384 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 23 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04327 Viun-Chr3 51039953 51041483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04327 20 366 Acyl Lipid Metabolism Gene Families AT4G10950 27.123 1.13e-27 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04327 3 51039953 51041483 Viun3g04327 3 51039953 51041483 ECH